ggKbase home page

rifcsphigho2_01_scaffold_12835_12

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Pacearchaeota_37_14

partial RP 30 / 55 MC: 5 BSCG 17 / 51 MC: 1 ASCG 26 / 38
Location: comp(9054..9830)

Top 3 Functional Annotations

Value Algorithm Source
rps5p; 30S ribosomal protein S5P; K02988 small subunit ribosomal protein S5 Tax=RBG_16_Pacearchaeota_35_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.5
  • Coverage: 254.0
  • Bit_score: 302
  • Evalue 4.30e-79
rps5p; 30S ribosomal protein S5P; K02988 small subunit ribosomal protein S5 id=5041779 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18 similarity UNIREF
DB: UNIREF100
  • Identity: 51.5
  • Coverage: 268.0
  • Bit_score: 258
  • Evalue 8.70e-66
30S ribosomal protein S5 similarity KEGG
DB: KEGG
  • Identity: 51.4
  • Coverage: 249.0
  • Bit_score: 248
  • Evalue 1.50e-63

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Pacearchaeota_35_8_curated → Pacearchaeota → DPANN → Archaea

Sequences

DNA sequence
Length: 777
ATGGTAAAAGAAGAAAAAACTGATTCAGCTGAAAAAAAGAAGGAAATAAATAATGGAGCTGAAGAAGCAGCAGAAGCTCCAAGAGAAACAGGGGTTAAAAGACGGGAGAGGCCGGCGGCACCTACTAGGGAAGAGGTAATATCTAAGTGGAATCCAAAAACAAAGATTGGAAAGCTTGTCAAGTCAGGAGAGGTAAGGGATATTGATTATATATCTGAAAAATACAAGATTTTAGAGCCGGAAATAATTGACACCCTTCTTGACTTAAAGAGCGACTTGCTGCTGGTTGGGCAGGCCAAGGGAAAATTCGGAGGCGGAAAGAGAACCTGGAGAAAACAGACTCAGAAAAAAACAGCAGAAGGAAATGTTCCTACTTTCTCAATAATGGCCATAGTAGGTGATGAAAATGGAAGGGTTGGAATAGGAAAGGGAAGAGCAAAGGAGACTGTTCCTGCAAAAGAAAAGGCAGTAAGAAATGCCAAGCTTGGTTTAACTAAAATAACAAGGGGATGCGGAAGCTTTGACTGCTCATGCGGACTGCCCCACAGCATTCCTGCAAGAGTTGAAGGAAAGTGCGGAAGCATCAGAATAATTTTAATGCCGGCTCCGCAGGGAACGGGATTAGTAGCGGGAGACGAGCTCAAGAAATTGCTAAGGCTGACAGGGATAAAGGACATATACAGCAAAACTTTCGGAAAGACAAAGACTACAATGAATCTCGCCAAAGCGTGCCTTGATGCTTTAAAGAAAACAAGCAAAATACAGATGCAGGAATAA
PROTEIN sequence
Length: 259
MVKEEKTDSAEKKKEINNGAEEAAEAPRETGVKRRERPAAPTREEVISKWNPKTKIGKLVKSGEVRDIDYISEKYKILEPEIIDTLLDLKSDLLLVGQAKGKFGGGKRTWRKQTQKKTAEGNVPTFSIMAIVGDENGRVGIGKGRAKETVPAKEKAVRNAKLGLTKITRGCGSFDCSCGLPHSIPARVEGKCGSIRIILMPAPQGTGLVAGDELKKLLRLTGIKDIYSKTFGKTKTTMNLAKACLDALKKTSKIQMQE*