ggKbase home page

rifcsplowo2_01_scaffold_9782_11

Organism: RIFCSPLOWO2_01_FULL_Archaea_Pacearchaeota_43_24

near complete RP 35 / 55 MC: 4 BSCG 18 / 51 MC: 1 ASCG 31 / 38 MC: 2
Location: comp(6352..9801)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase, subunit a' (EC:2.7.7.6); K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] Tax=AR6 similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 999.99
  • Bit_score: 2228
  • Evalue 0.0
DNA-directed RNA polymerase id=5800702 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized similarity UNIREF
DB: UNIREF100
  • Identity: 53.8
  • Coverage: 849.0
  • Bit_score: 900
  • Evalue 1.50e-258
DNA-directed RNA polymerase similarity KEGG
DB: KEGG
  • Identity: 53.6
  • Coverage: 825.0
  • Bit_score: 899
  • Evalue 7.20e-259

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

AR6 → Pacearchaeaota → DPANN → Archaea

Sequences

DNA sequence
Length: 3450
ATGTCACAGATAATCGTAACCAAACAAGTGAAGGCCATATACTTCACCTTAGTCTCGCCAGAAGAGGTAAAGAAACTTTCGCGAGCGAAGATTGTAACGCCAGAACTTTACGACATGGATGGATATCCTGTAGATGGGGGACTTATGGACCTTCGCCTCGGGGCTATAGATCCTGGAGTAAGATGCAGAACCTGCGCTGGAAAATTAAAGGAATGTTTGGGACACTTTGGCTATATCGAGACTGCAAGGCCAGTCGTTCATATCAAGTACATAGGGATGATAGAGATGTTCCTGAAGGCAACCTGTGAAGAATGCGGAAAGATACTGATGCATAAAGAGGATGCACTAAGGTTAAGGCTTAAGGAAAGGATCGCGAAGGCACGAGTTGCGAAGAAATGCCCTCATTGCAATGCAAAGCAAGGAAAAGTGAAATTTGAAAAGCCATATTCATTCTACATAGACGGAAAGAGAGTTTTCCCTTCAGCTATAAGGAGCATGCTATCCCGCATCAGCAATGAGGACGCAGCGTTGCTTGGAGCGACAAACTGCAGGCCGGAAAACGCCATCCTTACCCTGATTCTTGTTCCGCCAGTTACTGTAAGGCCATCAATCACACTTGAGACAGGAGAGAGAAGTGAAGATGACCTTACTCACAAACTTAGCGACATAGTGAGATCAAATCAGCGTCTATGGGAAAATCTGAATGCAGGAGCGCCAGAGGTGATTATCGAAGACTTGTGGGATTTGCTGCAATATCACGTAGCTACATTCTTTGACAATACTATCTCTCAGGTTCCTCCAGCAAGGCACAGGAGCGGCCAGCCTCTTAAGACTCTCACTGAAAGAATAAAGGGTAAGGAAGGAAGAATAAGGCACAACCTGGCGGGAAAGAGAGTTGATTTCAGCAGCAGAACAGTTGTAAGCTCTGATCCATATCTGAAGATCGATGAGGTTGGAATACCTCTGATGATAGCAACAACACTAACTGTTCCAGAAAAAGTTACAAGCTCTAATATCGAATATTTGAAGCAGTATATACGCAATGGAAAACAGCATCCCGGAGCGAATTACATTGTAAGGCCAGATGGAAGGAAGAAAAGGATAACGGATGATCTTAAAGATGAGCTGATCAATGAACTAGAGATAGGATATGTAGTTGAGCGCCATCTGCGTGATGGAGATGTCCTTCTCTTCAACAGACACCCATCTTTGCACAGGATGAGCTTGATGGCACATTACGCAAAAATCTTGCCTGGAAAAACTTTCCGCCTTAATCCTATTGCAACATTCCCATACAATGCGGATTTTGATGGAGACGAGATGAATATCCACGCTCCGCAGACTGAGGAAGCGCGCAGTGAAGCCATACAGCTTCTCGACATCAAGAATCACCTAGTGACTCCGAAGGATGGAACCAATGTTTTGGGATGCATAGAGGATTCTATCTCCGGAAATTTCATCCTCACTTCTGGAATGCAGATAAATAAGGATGAGGCCATCCAATTGATTGCAGAGACAGGAGCAGAAGTGCCTAAAGAAGCGAAAAGATGGCCGTCTGTTGTCGATGGAAAAGTAATCTTCTCTGCCCTTCTTCCAAAGATCGACCTTAAGATCAAAAGATTGACGATTGAAGACGGAAAGATCATCAAGGGAGTTGTGGATGATGAGTCTATAGGGATTGAGAAAGGAAAGCTTATCCTTGAGATGATGAAGACTTATCCTAAGGAAGAGGTCATCCTCATGCTAGAGCGGATTTTCAGGCTTGGTTGTGGAGTCTTGTCTAGAAGGGGATTTACCGTAGGGCTGGGTGATGTTGTCGTAAACCTTGCCGGCGAGACACAAGAGCTGGTGAAAGACGCGTATAAGAAAGTTGGAGAGATAATTGATAATTTCCATGGAGGAAAGCTTAAGGCCCTTCCAGGAAAGACTCTTGATGAGACGAGGGAGATTGAAATCCAGCAAGCTCTTGATGGGATCAGAAAGAAGATAGCGGGAGTAATTCTTGAGAAGATAAATCGGGAAGAAGAGAAGAATAATCCTGTAAACATCATGATTTTCTCTGGAGCAAGAGGATCGCCAGTCAATAGGGTTCAGATGGGCTCGCTCGTCGGCCAGCAGATCTTATGGGGCAAGAGAATCGAGCTCGGATATAAGAAGAGGACTCTCAGCCATTTCATGCAGGGAGAGCTGATGCCTGCCTCAAGAGGATTTGTCGCAAACAATTTCTACACAGGTCTTGCTCCATATGAATTTTTCTTCTCTGCTATAACTGGAAGAGATAGCCTGATGGATACTGCTTTAAGGACACCAAAGAGCGGATACTTGTACAGGAGACTTGCTAACTCTCTTCAAGATGTAAAAGTAGAATATGATGGGACGATAAGGGATGGAACCTCGAACATCGTGCAGTTCATGTATGGAGATGATGGAATCTCTGTCGACAGGGCGCACTTGAAAGAGAAGATCACACCTGCAGAAGCTATAGGGATAATCACTGCACAGAGCTTTGGAGAGCCATCTACACAGATGACACTGAATGTTTTCCACTTCGCTGGAGTCGCAGAATTCGCAATCACACTCGGACTTCCAAGATTGATTGAGTTGTTCGATGCAAGAAAAGAGCCTACAACTCCAGTCATGGAAGTGTATTTGAAACCAGAATACAATAATGAGGTGGATGCAGAGAGGATAGCTTCAAAGATAAGGGAAGTTACATTGAAAGAGCTCGCATCTGAAATCCAGATTAATTTCACTGAGCTGAAGATAGATGTCAAATTTGATATGAAGGCGATGAAGCAGCACAAGCTCTCTGCCGAGGATGTCGCAGAACAGTTCAAGGATAAAGACTTGAGTGTAAGAGTTACAAAAGAAGGTCTTAGTGTGAAGCCGAAGGGCAAGGCAGATTACAAAGATATCTACAAGATCAAGGGCAAGCTTAGTGGAATAATTGTCTCTGGAGTGAAGGGAGTAAAGGAAGTTCTTCCTCTCAAGCGTGGAGGAGAGAGAGATTACGTCATTCTTACCTACGGAAGCAATCTCGGGGAGGTCTTGAAGATAAAAGAGGTAGATACAAAGAAAACAAGGACTAATAATATCTACGAGGTCGCGAATAATCTTGGGATAGAGGCTGCGAGACAGCTCATCATAGATGAGACTAAGAGCGTTATCGAGAAGCAAGGAATCAGCATTGATGAGAAACACATCAAGCTTATCGCTGATTTGATGACTGCGAATGGAGATGTGCTTGGAGTTACAAGGACTGGGATCATCAAGGAGAAAGGAAGCCTTCTTGCAAAGGCAGCGTTCGAGACTCCGATAAAGCACTTTGTTGCTGCAACATTAAGTGGTGAGAAGGACGTTCTTTCAAGCGTTATCGAGAATGTAATAATCAACCAGCCTGTTCCTGTTGGTCTGTTCCTGTTGGTACGGGATTGCCAGGCTTGTTTGTGA
PROTEIN sequence
Length: 1150
MSQIIVTKQVKAIYFTLVSPEEVKKLSRAKIVTPELYDMDGYPVDGGLMDLRLGAIDPGVRCRTCAGKLKECLGHFGYIETARPVVHIKYIGMIEMFLKATCEECGKILMHKEDALRLRLKERIAKARVAKKCPHCNAKQGKVKFEKPYSFYIDGKRVFPSAIRSMLSRISNEDAALLGATNCRPENAILTLILVPPVTVRPSITLETGERSEDDLTHKLSDIVRSNQRLWENLNAGAPEVIIEDLWDLLQYHVATFFDNTISQVPPARHRSGQPLKTLTERIKGKEGRIRHNLAGKRVDFSSRTVVSSDPYLKIDEVGIPLMIATTLTVPEKVTSSNIEYLKQYIRNGKQHPGANYIVRPDGRKKRITDDLKDELINELEIGYVVERHLRDGDVLLFNRHPSLHRMSLMAHYAKILPGKTFRLNPIATFPYNADFDGDEMNIHAPQTEEARSEAIQLLDIKNHLVTPKDGTNVLGCIEDSISGNFILTSGMQINKDEAIQLIAETGAEVPKEAKRWPSVVDGKVIFSALLPKIDLKIKRLTIEDGKIIKGVVDDESIGIEKGKLILEMMKTYPKEEVILMLERIFRLGCGVLSRRGFTVGLGDVVVNLAGETQELVKDAYKKVGEIIDNFHGGKLKALPGKTLDETREIEIQQALDGIRKKIAGVILEKINREEEKNNPVNIMIFSGARGSPVNRVQMGSLVGQQILWGKRIELGYKKRTLSHFMQGELMPASRGFVANNFYTGLAPYEFFFSAITGRDSLMDTALRTPKSGYLYRRLANSLQDVKVEYDGTIRDGTSNIVQFMYGDDGISVDRAHLKEKITPAEAIGIITAQSFGEPSTQMTLNVFHFAGVAEFAITLGLPRLIELFDARKEPTTPVMEVYLKPEYNNEVDAERIASKIREVTLKELASEIQINFTELKIDVKFDMKAMKQHKLSAEDVAEQFKDKDLSVRVTKEGLSVKPKGKADYKDIYKIKGKLSGIIVSGVKGVKEVLPLKRGGERDYVILTYGSNLGEVLKIKEVDTKKTRTNNIYEVANNLGIEAARQLIIDETKSVIEKQGISIDEKHIKLIADLMTANGDVLGVTRTGIIKEKGSLLAKAAFETPIKHFVAATLSGEKDVLSSVIENVIINQPVPVGLFLLVRDCQACL*