ggKbase home page

rifcsplowo2_01_scaffold_1629_17

Organism: RIFCSPLOWO2_01_FULL_Woesearchaeota_37_43

near complete RP 34 / 55 MC: 1 BSCG 7 / 51 ASCG 32 / 38 MC: 1
Location: comp(14607..15146)

Top 3 Functional Annotations

Value Algorithm Source
integral membrane transport protein; K01975 2'-5' RNA ligase [EC:6.5.1.-] id=5046832 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c similarity UNIREF
DB: UNIREF100
  • Identity: 43.5
  • Coverage: 184.0
  • Bit_score: 151
  • Evalue 6.10e-34
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1579376 species="A similarity UNIPROT
DB: UniProtKB
  • Identity: 43.5
  • Coverage: 184.0
  • Bit_score: 151
  • Evalue 8.60e-34
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 41.8
  • Coverage: 177.0
  • Bit_score: 141
  • Evalue 2.30e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

archaeon GW2011_AR18 → Archaea

Sequences

DNA sequence
Length: 540
ATGAGACTCTTCATAGCAATAAACCTCCCCAAGCAAGTCAAGGACTATTTATTTGAGCTGAAAGACGAATTCAGGGGCCTTGGAAAATTCAATTTCACAGCAAAAAGCAAGTATCATATAACAATGAAATTTTTTGGTGAAATAAAAGAAGACAAACTAGAGGAGATAAAGGAGAGGCTGTCAAGCGTGAAGTTTAGTTCATTTGAAACTTCATTGGATGAACTTGGGCACTTTAACAGCAGGGTATTGTGGGTTAACATAAAGCCAAACGAGAAAGTCCTTAGCTTGGCCAGGAAAATAGACGAGCAGGTGATTGAATTTCCAAACATTCATGATTTTTCATTTCACATAACTTTAGCTAGGATAAAGTCAATAAAAGATAAAAAGATGTTTGAAGAAAAGCTGAAGGCAGAAGTTAAAAAATTAAAGTTTGGGATAAACTCGTTCGAATTAATGAAAAGCATCCTGTCAAAGGACGGCGCCAAATATGAAATATTGGAGGCATACAGAGCCTCCACAATAACAAACCTTAAATACTAA
PROTEIN sequence
Length: 180
MRLFIAINLPKQVKDYLFELKDEFRGLGKFNFTAKSKYHITMKFFGEIKEDKLEEIKERLSSVKFSSFETSLDELGHFNSRVLWVNIKPNEKVLSLARKIDEQVIEFPNIHDFSFHITLARIKSIKDKKMFEEKLKAEVKKLKFGINSFELMKSILSKDGAKYEILEAYRASTITNLKY*