ggKbase home page

rifcsplowo2_01_scaffold_9179_10

Organism: RIFCSPLOWO2_01_FULL_Archaea_Woesearchaeota_50_16

partial RP 33 / 55 MC: 5 BSCG 6 / 51 ASCG 26 / 38
Location: comp(7924..8796)

Top 3 Functional Annotations

Value Algorithm Source
lytB; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2); K02945 small subunit ribosomal protein S1; K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] id=5048457 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b similarity UNIREF
DB: UNIREF100
  • Identity: 47.0
  • Coverage: 279.0
  • Bit_score: 248
  • Evalue 7.80e-63
Small subunit ribosomal protein S1, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000313|EMBL:KHO45491.1}; EC=1.17.1.2 {ECO:0000313|EMBL:KHO45491.1};; TaxID=1579365 species="Archaea.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 47.0
  • Coverage: 279.0
  • Bit_score: 248
  • Evalue 1.10e-62
hydroxymethylbutenyl pyrophosphate reductase similarity KEGG
DB: KEGG
  • Identity: 44.4
  • Coverage: 279.0
  • Bit_score: 242
  • Evalue 1.20e-61

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

archaeon GW2011_AR3 → Archaea

Sequences

DNA sequence
Length: 873
ATGAAAATCACCTTGGCGAAATATGCAGGGTTTTGCTTCGGGGTAAAGGACGCGATGGACGCCGCAGAAGCGTTGGGAACCGATGTGCCCCATCCGATCCACATCCTCGGCCATCTCATCCATAACAAGCAGGCCGTGGACCGGTTGGCCAAGAAGGGCATCCGCATGGTCCCCCATGAGGAGCTGGACACCATTACAAAAGGGACGGTGGTGATTTCCGCGCACGGCGTTCCCGATGACACCATCGCGAAAGCGAGGGATAAAGGTCTGCACGTCGTCGATACCACCTGCCCCTTGGTGCGAAAAGTCCACGACGCTACCAAGAAGATGGAGAAAGAGGGCTATGAAATCCTGATTTACGGCGATGAGAAGCATACCGAAGTCAAAGGCATACGAGGCAATTTAAGAAAATCAGATGTAATCCATAATCCTTCTGAGATCAATGTCCAGTTCGGCAGGAAGAAAGTCTTCATGGTTTCCCAAACGACGCAGGAGATTGAAAAGTTTCGTGAACTGGCGGAAAAGCTGAAAAAAGAGAATCCGCAGCTGAAAGTCGAGGACACCATCTGCGTGCCCACTAAATTGCGGCAGAAGAACTCGAGGGAGCTGGCAAAAATCGTGGACGTGATGATTGTGATAGGGGGCTACCACAGCGCCAACACCCGGCATCTGGCCGAGGTCTGCAACCGCTATACGCCTACGCACCATATCGAGACCGCGGATCGGCTTCAGCGGGAATGGTTCTCGGGCAAGCGGCATTGCGGCGTCACGGCCGGAGCTTCCACGCCGGACTGGATCATCAACAGCGTCATAGAGCGGCTGCAGAATGAATTTGGAGGAGCGATGGAAGAGCTCCCGTTGCAGAAAAATTAA
PROTEIN sequence
Length: 291
MKITLAKYAGFCFGVKDAMDAAEALGTDVPHPIHILGHLIHNKQAVDRLAKKGIRMVPHEELDTITKGTVVISAHGVPDDTIAKARDKGLHVVDTTCPLVRKVHDATKKMEKEGYEILIYGDEKHTEVKGIRGNLRKSDVIHNPSEINVQFGRKKVFMVSQTTQEIEKFRELAEKLKKENPQLKVEDTICVPTKLRQKNSRELAKIVDVMIVIGGYHSANTRHLAEVCNRYTPTHHIETADRLQREWFSGKRHCGVTAGASTPDWIINSVIERLQNEFGGAMEELPLQKN*