ggKbase home page

rifcsplowo2_01_scaffold_1958_8

Organism: RIFCSPLOWO2_01_FULL_Archaea_Woesearchaeota_29_14

near complete RP 37 / 55 MC: 7 BSCG 6 / 51 ASCG 33 / 38 MC: 5
Location: comp(6219..7145)

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=4 Tax=Archaeoglobaceae RepID=TF2B_ARCFU id=5103059 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 309.0
  • Bit_score: 543
  • Evalue 1.60e-151
Transcription initiation factor IIB similarity KEGG
DB: KEGG
  • Identity: 88.6
  • Coverage: 308.0
  • Bit_score: 543
  • Evalue 4.60e-152
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.6
  • Coverage: 308.0
  • Bit_score: 543
  • Evalue 2.30e-151

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

archaeon GW2011_AR20 → Archaea

Sequences

DNA sequence
Length: 927
ATGACATCCTATGTTAAGAAATGCCCAGAATGTGGAGGCATAAATCTTATTCTGAACAAAGAAAAAGGTGAAGTGATTTGTAAAGATTGTGGACTAGTGATTGAAGAGAAAATGATTGATTTCGGTCATGAATGGAGAGAGTTTGATCATGATCAGGCTGCTAAAAGAAGAAGAGCAGGAGCTCCAATGACTTACACAAAATATGATAGAGGTTTAGGAACAAGTGTTGGACAAAGATCAGATGTTTATCAGCTTGGAAGCAAGGAAAGAAATAAATTCTTTAGATTAAGAAAATGGCAATATAGAATATCAACTGCTATTGAAAGAAATTTAAAATTAGCTTTGGCTGAGTTGAAAAGAGTTAGTTCTTATCTTAAATTACCAAAAAGCGTGGAAGAAGAATCAGCTAGAATATATACAATGGCGGTTCAACGTGGATTGGTAAGAGGAAGAAGCATGGAAAGTGTGGTTGCAGGAGCACTATATGCTGCTTGCAGAAGACATGAAGTTCCAAGAACATTAGATGAGTTAAGTGAAGCTTCAGGAATAGACAAAAAAGAAATTGGAAGAACATATAGATTTATTACAAGAGAATTAGGAATAAGAATATTACCAAGTAATCCAGTAGATTATATACCAAGATTTGCATCTGCTTTGAAATTAAGTGCTGAAACACAATCCAAAGCTGTTGAGATATTAGAAAAGGCTCAAAAAGCTGAGTTAACTTCAGGAAGAGGACCAACTGGAATTGCAGCTGCAAGTTTATATGTTGCTGCTTTAACTAATAATGAGAAAAGGACTCAGAGAGAAGTTGCGGATATAGCTGGAGTTACAGAAGTTACAATAAGAAATAGATATAAAGAGTTGTTAAAAGAATTAAAATTAAAAGATCAGATAAAGAAGAAGAATAAGAGAGAAGAGGAGTAG
PROTEIN sequence
Length: 309
MTSYVKKCPECGGINLILNKEKGEVICKDCGLVIEEKMIDFGHEWREFDHDQAAKRRRAGAPMTYTKYDRGLGTSVGQRSDVYQLGSKERNKFFRLRKWQYRISTAIERNLKLALAELKRVSSYLKLPKSVEEESARIYTMAVQRGLVRGRSMESVVAGALYAACRRHEVPRTLDELSEASGIDKKEIGRTYRFITRELGIRILPSNPVDYIPRFASALKLSAETQSKAVEILEKAQKAELTSGRGPTGIAAASLYVAALTNNEKRTQREVADIAGVTEVTIRNRYKELLKELKLKDQIKKKNKREEE*