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rifcsplowo2_01_scaffold_8693_6

Organism: RIFCSPLOWO2_01_FULL_Archaea_Woesearchaeota_29_14

near complete RP 37 / 55 MC: 7 BSCG 6 / 51 ASCG 33 / 38 MC: 5
Location: comp(2883..4085)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RIFCSPHIGHO2_02_FULL_OD1_Magasanikbacteria_51_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 28.3
  • Coverage: 286.0
  • Bit_score: 95
  • Evalue 1.60e-16
RNA polymerase sigma factor SigA n=2 Tax=Thermotoga RepID=A5IMD4_THEP1 similarity UNIREF
DB: UNIREF100
  • Identity: 33.5
  • Coverage: 194.0
  • Bit_score: 82
  • Evalue 1.30e-12
RpoD family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 28.0
  • Coverage: 293.0
  • Bit_score: 82
  • Evalue 2.90e-13

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Taxonomy

R_OD1_Magasanikbacteria_51_14 → Magasanikbacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1203
ATGGGAAGTCTAAGAAAATTATCTCATGAACAAGAAAGAGAAGTAGCTTTAGCTTATCTTTGTGGTGTAAAGACTGAAGATATTGGAGAACAATATTGTGTTTCTGGAGCAACAATTAATGCTAATATAATTAGAAAACGCTCTCATGAATGGAATGATCCACTTGTAGAGTTTTATAGATCATCACAAAATAGGGGAAGGAATTCTGCCCATATATTTCTCGCTTTTAGTGGAGAAAGTAATTTACCTAGTATAGGTTTAATTGATTTTGATAGGGAAAGATCTGTCTCTGATCTTGTGGATGATAAAGTTTATGTCCCACTCGTTGATGGGATTATTGAAAGAACTGCATTAAGAAGATATATAGCTAAAAAAACTCCTGATAAAACCCCCTACGATACTCTTATTAAAACTATTGTGGGAAAAAGTATATTTCCACCTGATCAGGCTAGTGGAATGATATGGCCTTTATTAATAAATATTCTAAAAGATGAATATCATAATCCTGAATTCTCTCTTGAAGATGTTTCTGATAGAGTTGAAGATGTTGTTGTTGAAAAAGTAAAAAATGGTGGAATTGTAATGACCCCTTATAAAAAAGAAATTATTCATAGAGTTTTAGGAACCTTAGTTGGTAGAGGTAAAAAAGTTATAGGAATGAGATATGGATTGGATGGTTATGATGGACCAAAAAGTTTAGAAGAAACTGGTAATCAATTTAATGTTACTAGAACAAGATTGAAACAGATTGAGGAAAAAGCATTAAGACAATTAAGGCATCCGATTAGATTAAGACAATTGAACTTTTTAGCTGGTTTAGCAACTGATGAAGATATAAAGACCTATTTAGAAAATGTGCATTATGAACAAGAACGTGAAAAATTAGAAAATGAATTAACAACACAGATTAGAGAGGAACTAGTTGGAAGAATGTTTTCAAATCCTCTTTTAAGATCAAGTGGATATAATGAAAATCAAGTAAGGCGTATTTTAAGTATGGATACTAATCCTAATAAAAGTTTAGAAGAATTAGAAGTTAGTGTAAGAACAGCAAATCTTTTTAAAAACATTGGAATAAAAACTATCGGAGAATTAATAGCGCTAACACCTAGACAAATAATTGGATATAGAAATAGTGGTCAAAAAACTCTTAGAGAAATTCAAGATGTTTTGGCAGATTTAGGTTTAAGCTTAGCACAATAA
PROTEIN sequence
Length: 401
MGSLRKLSHEQEREVALAYLCGVKTEDIGEQYCVSGATINANIIRKRSHEWNDPLVEFYRSSQNRGRNSAHIFLAFSGESNLPSIGLIDFDRERSVSDLVDDKVYVPLVDGIIERTALRRYIAKKTPDKTPYDTLIKTIVGKSIFPPDQASGMIWPLLINILKDEYHNPEFSLEDVSDRVEDVVVEKVKNGGIVMTPYKKEIIHRVLGTLVGRGKKVIGMRYGLDGYDGPKSLEETGNQFNVTRTRLKQIEEKALRQLRHPIRLRQLNFLAGLATDEDIKTYLENVHYEQEREKLENELTTQIREELVGRMFSNPLLRSSGYNENQVRRILSMDTNPNKSLEELEVSVRTANLFKNIGIKTIGELIALTPRQIIGYRNSGQKTLREIQDVLADLGLSLAQ*