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rifcsplowo2_01_scaffold_20588_3

Organism: RIFCSPLOWO2_01_FULL_Pacearchaeota_32_14

partial RP 27 / 55 MC: 6 BSCG 15 / 51 ASCG 23 / 38 MC: 2
Location: 996..1799

Top 3 Functional Annotations

Value Algorithm Source
rfcS; Replication factor C, small subunit (rfcS); K04801 replication factor C small subunit Tax=CG_Pacearch_06 similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 265.0
  • Bit_score: 444
  • Evalue 9.60e-122
rfc; replication factor C small subunit; K04801 replication factor C small subunit id=5046355 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b similarity UNIREF
DB: UNIREF100
  • Identity: 60.2
  • Coverage: 261.0
  • Bit_score: 320
  • Evalue 1.50e-84
Replication factor C small subunit similarity KEGG
DB: KEGG
  • Identity: 55.1
  • Coverage: 256.0
  • Bit_score: 297
  • Evalue 3.80e-78

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Taxonomy

CG_Pacearch_06 → Pacearchaeota → Archaea

Sequences

DNA sequence
Length: 804
TTGATTACAGTCAAAACTTTATTCGCAGATACTTGGAAAGAAAATTATCTTGAATTAAACGCCAGCGATGAAAGAGGAATAGATGTTGTAAGACAAAAAGTAAAAGACTTTGCAAGAACAAAAGCCTTGGGGAGCGTTCCCTTCAAAGTTATATTCCTAGATGAAGCAGACGCTCTTACAAAAGAAGCACAACAGGCGTTAAGAAGAACTATGGAAAATTACTCCAATACTTGCAGATTTATCTTATCATGTAATTATTCGTCTAGAATCATTGATCCCATACAATCAAGATGTGTAATCTTTAGATTTAGATTACTTGAAAAGAAAGATATTGCTACTGTTGCACTACGAATTGCAGAAAAAGAAAATCTTAAGATAGCTGAAAGTGCATTCGAAACATTGTATGAAACTTCAGAAGGAGACTGTAGAAGAGCCATAAATCTTCTTCAGGCAACATCCTCCATTTCTCCAGATGTGACTTCAGAAATGCTTACCATGATAACTTCTGCAGCAAAACCTTCAGATATTAAAATTGTCTTAGATTACGCTCTAACAGGAGATTTTATTCAGTCAAGAGATAAACTTCTAGATGTAATGCTAAGAGAATCTGTTTCTGGAACAGATATAATAAAAGCGATTCAAAAAGAAATTTGGAACTTACAAATTGAACCAGAAACGAAGGTGAGATTAACTGAAAAAACAGGCGAAGTAGAATTTAGAATGATAGAAGGTTCTGATGAATTCGTTCAGCTTCAGTCTTTATTGGCTTCTTTTGTTTTGGCTGGACAGGGTAAACCTGTATAA
PROTEIN sequence
Length: 268
LITVKTLFADTWKENYLELNASDERGIDVVRQKVKDFARTKALGSVPFKVIFLDEADALTKEAQQALRRTMENYSNTCRFILSCNYSSRIIDPIQSRCVIFRFRLLEKKDIATVALRIAEKENLKIAESAFETLYETSEGDCRRAINLLQATSSISPDVTSEMLTMITSAAKPSDIKIVLDYALTGDFIQSRDKLLDVMLRESVSGTDIIKAIQKEIWNLQIEPETKVRLTEKTGEVEFRMIEGSDEFVQLQSLLASFVLAGQGKPV*