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rifcsphigho2_02_scaffold_40836_3

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_35_18

near complete RP 40 / 55 MC: 6 BSCG 15 / 51 ASCG 33 / 38 MC: 4
Location: comp(1589..2035)

Top 3 Functional Annotations

Value Algorithm Source
Putative HTH-type transcriptional regulator Tax=GWA2_Berkelbacteria_38_9 similarity UNIPROT
DB: UniProtKB
  • Identity: 48.0
  • Coverage: 123.0
  • Bit_score: 135
  • Evalue 6.90e-29
Transcription regulator, Lrp/AsnC family id=5050205 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b similarity UNIREF
DB: UNIREF100
  • Identity: 41.9
  • Coverage: 148.0
  • Bit_score: 134
  • Evalue 6.40e-29
ArsR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 41.0
  • Coverage: 144.0
  • Bit_score: 125
  • Evalue 1.40e-26

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Taxonomy

GWA2_Berkelbacteria_38_9 → Berkelbacteria → Bacteria

Sequences

DNA sequence
Length: 447
ATGAACAAAGAAATAGATGAAATTGACAAAAAAATCGTAAATCTTCTGCTTTTTGACGCAGATATTACGAACAGGGATATTGCTTCCAGGTGCAATATAGCTTTAGGAACAGTAAACAACAGGATAAACAAATTAAAAAAATTAGGGATAATAAAAAAGAAAACAATTATTGTGGATTATGAAAAGCTTGGCTATGCAATAGAAGTTATGGTTGCCTTGAAAATCAAGAAAGGCGGATTTTACGAGATAGCAAAGAAACTGGCTGCTGACCCGAATGTTTTTTTGGTTATAGACATAACCGGCGATTATGACGCAGAAATCCTTGCAAGGTTCCACGCAAAAAGGCAGCTGGACGGTTTTGTTAAAAAATTGCAGCAGGACCCTTATATTGAGTCTACGAGGACAAGATTAATATTAAACATATACAGGGAAAAGGAAATAAAATAG
PROTEIN sequence
Length: 149
MNKEIDEIDKKIVNLLLFDADITNRDIASRCNIALGTVNNRINKLKKLGIIKKKTIIVDYEKLGYAIEVMVALKIKKGGFYEIAKKLAADPNVFLVIDITGDYDAEILARFHAKRQLDGFVKKLQQDPYIESTRTRLILNIYREKEIK*