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rifcsphigho2_02_scaffold_1127_18

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_44_15

near complete RP 37 / 55 MC: 5 BSCG 18 / 51 ASCG 35 / 38 MC: 1
Location: 9955..10635

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4e n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z0T3_METPS similarity UNIREF
DB: UNIREF100
  • Identity: 43.7
  • Coverage: 231.0
  • Bit_score: 197
  • Evalue 1.60e-47
rps4e; 30S ribosomal protein S4e similarity KEGG
DB: KEGG
  • Identity: 43.7
  • Coverage: 231.0
  • Bit_score: 197
  • Evalue 4.50e-48
30S ribosomal protein S4e {ECO:0000256|HAMAP-Rule:MF_00485}; TaxID=304371 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella palu similarity UNIPROT
DB: UniProtKB
  • Identity: 43.7
  • Coverage: 231.0
  • Bit_score: 197
  • Evalue 2.20e-47

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Taxonomy

Methanocella paludicola → Methanocella → Methanocellales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 681
ATGTCAAGACACTTAAAAAGATACAACGCACCGAAATCGTGGGCAATCAAGAGGAAAGAAAGGAAATACATAATGAGGCTGAGCCCTGGGCCGCACAACAAGAAAATGAGTGTGCCTTTGAATATAGTCCTAAGGGATATGCTAAGCTTATCTGACACGAAGAAGGAGACAAAGAGGATACTTTATGCAAATGAAGTGCTGATAGACGGTGTAAGAAGGAAAGATGAGAAATTCCCGGTAGGGCTTTTTGATGTTGTTGACCTGAAGGGCTCAGGGAAGGCTTATAGGGTGACACTTGACGGAAACGGCATGATAAAGCTTGTTGAAGCAAAAGACCCGAAGGTAAAGCCGCTCAAGATCATCAGCAAGAGCCTTGCCAAGGGCGGCAGGGTGCAGCTTGGGTTCCATGACGGAAAGACAATCCTCACTGATGGCAGGAAATACCGAGTGGGTGATTCTGTGCTTGCAGAACTGCCTGAGATGAGCATCAAGAAGAGCCTTGAGCTGGAGAAAGGCGCATCGATATTCCTGATAGGAGGAAAAAACATCGGAGTAGTAGGAAAGGTCAAGGACATTGCAGGAAGAAGAATCATGTACGAAAGCAATGGGCAGACATACCAGACATTAAGAAGCTATGCTTTTGTAATAGGAGGGGACAAGCCGTCGATAGCTTTGGAATAA
PROTEIN sequence
Length: 227
MSRHLKRYNAPKSWAIKRKERKYIMRLSPGPHNKKMSVPLNIVLRDMLSLSDTKKETKRILYANEVLIDGVRRKDEKFPVGLFDVVDLKGSGKAYRVTLDGNGMIKLVEAKDPKVKPLKIISKSLAKGGRVQLGFHDGKTILTDGRKYRVGDSVLAELPEMSIKKSLELEKGASIFLIGGKNIGVVGKVKDIAGRRIMYESNGQTYQTLRSYAFVIGGDKPSIALE*