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rifcsphigho2_02_scaffold_5854_12

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_44_15

near complete RP 37 / 55 MC: 5 BSCG 18 / 51 ASCG 35 / 38 MC: 1
Location: comp(6311..6535)

Top 3 Functional Annotations

Value Algorithm Source
snRNP Sm-like protein; K04796 small nuclear ribonucleoprotein Tax=RBG_13_Woesearchaeota_36_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 77.0
  • Coverage: 74.0
  • Bit_score: 119
  • Evalue 2.00e-24
Sm ribonucleoprotein-like protein; K04796 small nuclear ribonucleoprotein id=5048697 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b similarity UNIREF
DB: UNIREF100
  • Identity: 78.4
  • Coverage: 74.0
  • Bit_score: 114
  • Evalue 3.50e-23
Like-Sm ribonucleoprotein core similarity KEGG
DB: KEGG
  • Identity: 63.5
  • Coverage: 74.0
  • Bit_score: 100
  • Evalue 1.90e-19

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Taxonomy

RBG_13_Woesearchaeota_36_6_curated → Woesearchaeota → DPANN → Archaea

Sequences

DNA sequence
Length: 225
ATGGAACAATCAAGGCCATTGGACGCATTGAATAAAGCGCGAAATAAGCGCGTTATGGTAGAGCTGAAGAACAACAGGCAGTATGTTGGCAAGCTCATAGCTTTCGACATCCACATCAATGTTGTGCTGGAAGATGCAGAGGAAAGGGAAGCGGGCGAGATGAAGAGGAAGCTCGGCTCCATATTCATAAGAGGGGACACAATCACTGTTATTTCTCCAGAGTAA
PROTEIN sequence
Length: 75
MEQSRPLDALNKARNKRVMVELKNNRQYVGKLIAFDIHINVVLEDAEEREAGEMKRKLGSIFIRGDTITVISPE*