ggKbase home page

rifcsphigho2_02_scaffold_452_11

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_30_12

near complete RP 35 / 55 MC: 4 BSCG 15 / 51 ASCG 34 / 38 MC: 3
Location: comp(7739..11218)

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase II large subunit {ECO:0000256|HAMAP-Rule:MF_00324}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00324};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00324};; TaxID=1579378 species="Archaea.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 56.9
  • Coverage: 999.99
  • Bit_score: 1398
  • Evalue 0.0
DNA polymerase II large subunit n=1 Tax=nanoarchaeote Nst1 RepID=R1E5T5_9ARCH id=5103156 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 56.9
  • Coverage: 999.99
  • Bit_score: 1398
  • Evalue 0.0
DNA polymerase II large subunit similarity KEGG
DB: KEGG
  • Identity: 56.9
  • Coverage: 999.99
  • Bit_score: 1398
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

archaeon GW2011_AR20 → Archaea

Sequences

DNA sequence
Length: 3480
ATGGTAGAAATAAGCCCAAAAATGCAGTTATATTTCAATGAATTAGATACGAAATTAAAAGAAGCTTATGAATTAGCGAATAATGCAAGAGCAAAAGGGTATGATCCTGAAGACAGAGTAGAGATTCCATTAGCGAGAGATATGGCAGAGAGAGTAGAGGGATTAGTTTCTGTTGTTGCTCCACAAATAAAAGGTAGCGGAGTAAGCCAGAGAATAAAAGAATTAGAATTAAAATACGGAAGCCAGAATTGGATGATATCATTCTTAATAGCAGAAGAGACAGCTAATGAAAAATTCTGCAAATTCAAAGATAAAAAAGAGGCAATGGAAGTAGCATTAAGAGTTGGATTAGCATATATAACAAATGGAGTTGTATCATCACCATTAGAAGGATTTGTGAAACTAGAACTAAGAAAAAGATTAGATGGAAAAGAATATTTCTGTTTATTTTTCGGAGGACCAATAAGAAGTGCAGGAACAACAGCTACTTGCATATTTTTAGGAGTTGCAGATTATGTAAGAATGAAGATGGGATATGATATTTATGATCCTACTGAAGATGAGATTAATAGAACATTTTCAGAATTAGAACATTTCCATGACAGAATCACAAATCTACAATATTTTCCTTCAAAAAGAGAGGCTGATTTTATAACAAAACATTTACCAATACAAATAGAGGGAGATCCAAGCGAGAAAATAGATGTACCAAATTATAAAAACTTACCAAGAGTAAGCACAAATAAATTAAGAAATGGGTTTTGTTTAGTAATGGCAGAAGGATTATGCCAAAAATTTGCTAAATTCTGGGGAAAATTCTCAAAATGGTATAAAGAAATGGGAATGGATCATTGGATATTCTTAGAAGAGTATGTAGCATTACAAAAAGAGGTAAAATCAAAAGGAAAAACTAAGGAGGGAGGAAAAGCAAAGATAAGTCCTGATTATACTTACATAAAAGATTTAGTAGCAGGAAGACCAGTATTAGGGCATCCATTAAGTGTTGGGGCATTCAGAGCTAGGTTAGGGAGAAGCAGGACAATGGGATTAAGTGATACATCAATACATCCAGCAACAATGAGAGTACTAGAAGATTTCATAGCATACGGGACACAGTTGAAAACAGAAAGACCAGGAAAGAGTATGGTACTAAGCAGTTGTGATACAATAGAGGGGCCAATTGTAAAATTAAAAAATGGGGATGTAGTATTTGTAGAAACAGAAGAAAAAGCAAAAGAGATAACAAAAGAAGTAGAAGAAATAATATTTGTAGGAGATATATTAATAAATTATGGATATTTCTTGAACAGAAATCATATATTAGCACCTATGGGATATAATGAGGATTGGTATGCATTAGAATTAGAAAAATCATTAGGAGAAAATAAAACAGAATATTCTGAATTAATTAAAAATATAAATTATATGAAATTAAGTTTTGATGAAGCATATGAAATAAGTAAGAAGAATTCAATACCATTACATCCAAGATTTACATATCACTGGAATGACCTGAATATAGAACAATTAAAACAATTAATAGAATGGCTAGGATTTGCAGTTGTAAAAGAAGAAAAAATAATAATACCATTAATGCCTGAAGATAAGAAAAAGAGAATATTAGAATTAATAGGATTACCGCATAAGAATGTAAATAATGAATATGTAGTAATTGAGGGAGATTGGGCAAAAGCATTTAGGTTAAGTCTAGGATTTTTGAATTCTGAATATGATAAAGAAAAAATAAATAATATTATTACTGAAGGAGCAAATGTATTAGAGATAATAAATAAATTATCTGAAGTAAAAATAAGAGACAAATCAGGATTGTATATAGGAAGCAGGATGGGAAGACCTGAAAAGGCTAAAATGAGAAAATTAACAGGAAGCCCACAAGCAATGTTCCCAGTAGGAAAAGAGGGAGGAAGACTAAGATGTTTCCAGGCAGCATTAGATAAAGGAAAAATCACAGCAGAATATTCAATATATTATTGTGAAAATTGTAAAAAAGAGAGTGTATATAGAAGATGTCAAACTTGTGATACTGTAACTACAAAAATTTCTCATTGCAAAGAATGTGAAGACAAAACAGGAAAATGCGGGCATGAAAAAGTTTCATCATATAAATATATAGACCTAAATATAAAAGAATATTTTGATAGTGCATTAAAAAAGTTAGAGACAAGAAATTATCCAGAACTAATAAAAGGTGTAAGAGGAACAAGCAATAAAGATCATATTCCAGAACATTTAGTTAAAGGGATATTAAGATCTATGAATGAAATCTATGTAAATAAAGATGGAACAACAAGATATGATATGACAGAAATGAGTTTAACACACTTTAAACCATTAGAGATAGGAACTACAGTTGAGAAATTAAAAGAATTAGGATATACACATGATACTTATGGGAAAGAACTAGAAAGAGATGATCAGATATTAGAAATAAAATGCCAGGATCTAGTTTTACCATCATGTCCCGAGAGTACAGATGAAGGAGCAGATTTTGTATTATTCAGAGTTGCAAAATTCTTAGATGAATTATTAGAAAAATTATATGGAATGCCAAGATATTATAACTTGAAAAATAAAAGTGATTTAGTAGGACATTTAGTAATAGGATTAAGCCCCCATACATCAGCTGGAATTGTAGGAAGAATAATAGGATTTTCAAAAACACAGGCAATGTTAGCAAATCCACTATTTCATAGTATTATGAGACGTGACGCAGATGGAGATGAAAGTTGTGTTATGTTATTAATGGATGCATTATTGAATTTTTCACCAAAATTATTAAGCAATCATAGAGGAGCAACACAAGATGAACCATTAGTATTAAGTTCAATGATAATACCAGCAGAGGTAGATGATATGGTGTTTGATATGGATATAACTTTTAAATATCCTTTAGAATTATATGAATCTTGTTTAGAATATAAATCTGCATCAGAAGTAAAAATAAAAACATTAAAATCAGATTTAGGGAAAGAGGGACAATTTGAGGGATGGGGATTCACACATGATACATTAAATCTAAATAATGGAGTAAGATGCAGCAGTTATAAAACATTACCAACAATGCAGGATAAAGTAGAAAAACAGATGATATTATGTACAAAATTAAGAGCAGTAGATGAACATGATGTTGCAAGGTTAATAATAGAGAGACATTTCATAAGAGATATAAAAGGAAATCTAAGAAAGTTCTCAACGCAACAATTCAGATGTGTAAGTTGTAATGAAAAATATAGAAGACCAACATTAAAAGGAAACTGCAGCAAATGTTTTGGGAAAATAATATTTACAATATCAGAAGGATCAGTAATGAAATATTTAGAACCAAGTATAAGTCTAGCTAATAAATATAATATACCACCTTATTTGAAACAGACATTAGAATTAGCAAAACAAATGGCAGAAATGGTATTTGGAAAAAAGAAAGAAAAACAAGAAGGATTAGGAAAGTGGTTTGGATAA
PROTEIN sequence
Length: 1160
MVEISPKMQLYFNELDTKLKEAYELANNARAKGYDPEDRVEIPLARDMAERVEGLVSVVAPQIKGSGVSQRIKELELKYGSQNWMISFLIAEETANEKFCKFKDKKEAMEVALRVGLAYITNGVVSSPLEGFVKLELRKRLDGKEYFCLFFGGPIRSAGTTATCIFLGVADYVRMKMGYDIYDPTEDEINRTFSELEHFHDRITNLQYFPSKREADFITKHLPIQIEGDPSEKIDVPNYKNLPRVSTNKLRNGFCLVMAEGLCQKFAKFWGKFSKWYKEMGMDHWIFLEEYVALQKEVKSKGKTKEGGKAKISPDYTYIKDLVAGRPVLGHPLSVGAFRARLGRSRTMGLSDTSIHPATMRVLEDFIAYGTQLKTERPGKSMVLSSCDTIEGPIVKLKNGDVVFVETEEKAKEITKEVEEIIFVGDILINYGYFLNRNHILAPMGYNEDWYALELEKSLGENKTEYSELIKNINYMKLSFDEAYEISKKNSIPLHPRFTYHWNDLNIEQLKQLIEWLGFAVVKEEKIIIPLMPEDKKKRILELIGLPHKNVNNEYVVIEGDWAKAFRLSLGFLNSEYDKEKINNIITEGANVLEIINKLSEVKIRDKSGLYIGSRMGRPEKAKMRKLTGSPQAMFPVGKEGGRLRCFQAALDKGKITAEYSIYYCENCKKESVYRRCQTCDTVTTKISHCKECEDKTGKCGHEKVSSYKYIDLNIKEYFDSALKKLETRNYPELIKGVRGTSNKDHIPEHLVKGILRSMNEIYVNKDGTTRYDMTEMSLTHFKPLEIGTTVEKLKELGYTHDTYGKELERDDQILEIKCQDLVLPSCPESTDEGADFVLFRVAKFLDELLEKLYGMPRYYNLKNKSDLVGHLVIGLSPHTSAGIVGRIIGFSKTQAMLANPLFHSIMRRDADGDESCVMLLMDALLNFSPKLLSNHRGATQDEPLVLSSMIIPAEVDDMVFDMDITFKYPLELYESCLEYKSASEVKIKTLKSDLGKEGQFEGWGFTHDTLNLNNGVRCSSYKTLPTMQDKVEKQMILCTKLRAVDEHDVARLIIERHFIRDIKGNLRKFSTQQFRCVSCNEKYRRPTLKGNCSKCFGKIIFTISEGSVMKYLEPSISLANKYNIPPYLKQTLELAKQMAEMVFGKKKEKQEGLGKWFG*