ggKbase home page

rifcsphigho2_02_scaffold_1628_3

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Diapherotrites_AR10_42_12

near complete RP 32 / 55 MC: 3 BSCG 22 / 51 ASCG 33 / 38 MC: 1
Location: comp(1488..1928)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional antiterminator NusG similarity KEGG
DB: KEGG
  • Identity: 64.4
  • Coverage: 146.0
  • Bit_score: 195
  • Evalue 1.10e-47
NusG antitermination factor; K02601 transcriptional antiterminator NusG id=5241007 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 similarity UNIREF
DB: UNIREF100
  • Identity: 64.6
  • Coverage: 147.0
  • Bit_score: 195
  • Evalue 4.00e-47
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.4
  • Coverage: 146.0
  • Bit_score: 195
  • Evalue 5.50e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

archaeon GW2011_AR10 → Archaea

Sequences

DNA sequence
Length: 441
ATGCTGTTTTCAGTCCGCACAACTGTTGGGCAGGAAAGCCTTGTAGTAGACATGCTTGGCAGAAAAGTCCGCGATGAAACACTGCCTGTTTACAGCATTGCAGTTATCCCCGGCCTCAAAGGATATATTCTCATTGAAGCACAGGACGAGCTGAATGTAAGAAACGCTATTGCGGGAACTCCGCACATAAAAGGTTCTGGCATTGTAAAGGGCGCTGTAGACATAAAGGAAATCGAAGCACTGCTCGAATCAAAGCCATTGATGAAATCAATAAAGGAAAACGACAAAATTGAAATTGTTTCCGGTGCCTTTAAAGGAGAAAAGGCAAGGATAATGCGCGTAAACGATGCAAAGGAAGAGGTTGTGGTTGAACTCCTTGAAGCGGCAGTAAAAATTCCCGTTACCTTGAAAGCTGAAAACATAAGAGTGATAAAAGAATAA
PROTEIN sequence
Length: 147
MLFSVRTTVGQESLVVDMLGRKVRDETLPVYSIAVIPGLKGYILIEAQDELNVRNAIAGTPHIKGSGIVKGAVDIKEIEALLESKPLMKSIKENDKIEIVSGAFKGEKARIMRVNDAKEEVVVELLEAAVKIPVTLKAENIRVIKE*