ggKbase home page

rifcsphigho2_02_scaffold_1799_17

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Diapherotrites_AR10_42_12

near complete RP 32 / 55 MC: 3 BSCG 22 / 51 ASCG 33 / 38 MC: 1
Location: 15028..15537

Top 3 Functional Annotations

Value Algorithm Source
tRNA-intron endonuclease, archaea type (EC:4.6.1.16) similarity KEGG
DB: KEGG
  • Identity: 65.7
  • Coverage: 169.0
  • Bit_score: 233
  • Evalue 5.60e-59
tRNA-splicing endonuclease; K01170 tRNA-intron endonuclease, archaea type [EC:3.1.27.9] id=5240690 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 similarity UNIREF
DB: UNIREF100
  • Identity: 65.9
  • Coverage: 170.0
  • Bit_score: 233
  • Evalue 2.00e-58
tRNA-intron endonuclease, archaea type {ECO:0000313|EMBL:AJF59683.1}; EC=4.6.1.16 {ECO:0000313|EMBL:AJF59683.1};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.7
  • Coverage: 169.0
  • Bit_score: 233
  • Evalue 2.80e-58

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

archaeon GW2011_AR10 → Archaea

Sequences

DNA sequence
Length: 510
ATGGCTTTGCTTGCTGGGCAGAAAATAGTTGTTTCCGAAAAACGCCTTATAGACCAGCTGCGGCAGAAGGGTTTCGGAGAGCCCAAGCAGAAGCAATTGATTCTTGATTTGCGCGAAGCGCTTTTTCTGCTTGAAAAGCAGAAGCTTGAACTGCAGGATGCAGATGGCAAAGAAGTTTCAGAAGAGGCTCTCCTGAAATTCGCCTCGAAAAAGGAAAAAAACTTTTTTTCAAAATTCCTTGTTTTCCGCGATCTGCGCGAGAAGGGCTATTGCGTGAAAACAGGCTTCAAGTTCGGCTTTGATTTGCGGGTTTATCCGCGCGGAAAAAAGCCGGGAGAGGAGCATACCCAGTGGGTAATAAAGGTTGCGGAACAGTCCGAAAGGTTTTCAATGCCTGAATACAGCAGAATGGTAAGGATTGCGCAGAACCTGCATACAATGCTCCTGATCGCCATTGTGGATGCAGAGGGAGACATTAATTTTTACGAAGCAAAGAGAGTTCTCCCTTAA
PROTEIN sequence
Length: 170
MALLAGQKIVVSEKRLIDQLRQKGFGEPKQKQLILDLREALFLLEKQKLELQDADGKEVSEEALLKFASKKEKNFFSKFLVFRDLREKGYCVKTGFKFGFDLRVYPRGKKPGEEHTQWVIKVAEQSERFSMPEYSRMVRIAQNLHTMLLIAIVDAEGDINFYEAKRVLP*