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rifcsphigho2_02_scaffold_1736_17

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Diapherotrites_AR10_42_12

near complete RP 32 / 55 MC: 3 BSCG 22 / 51 ASCG 33 / 38 MC: 1
Location: 14899..15462

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA-binding protein n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I9N2_METCZ similarity UNIREF
DB: UNIREF100
  • Identity: 39.3
  • Coverage: 183.0
  • Bit_score: 138
  • Evalue 9.60e-30
RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 39.3
  • Coverage: 183.0
  • Bit_score: 138
  • Evalue 2.70e-30
Exosome complex component Csl4 {ECO:0000256|HAMAP-Rule:MF_00975}; TaxID=1041930 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocell similarity UNIPROT
DB: UniProtKB
  • Identity: 39.3
  • Coverage: 183.0
  • Bit_score: 138
  • Evalue 1.30e-29

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Taxonomy

Methanocella conradii → Methanocella → Methanocellales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 564
ATGAAGATTTTTTTGCCGGGAGACTTTCTCGCCACTGAAGAGGAATTTTCAACGGGAGAAAACACTTTCGAGGAAAACGGAAGCATTCTTGCAGATTCGCAGGGAACTCTCCTTGAAGACAAGTCAATGAAGACTGTCTCGATTGCAAAAACAAAAAAAATAACCCCTTTGAAAATCGGCAGCATTATTATCGGGATTGTTTCCTTTGTCAAAACAAATTCTGTTTCAATCGAAATCTCCCCCATGAAAAAAGGGGCTGAAAGGCAGATGGTCGGAGGCTCCTATGCAATGCTTCCCGTGCGCAACGTGGCAGAAGGATATGTGAAGGATTTGCACGCTGAATTCAAAATCGGGGACATTATAAAGGCAAAGATTTCCGAGTTAAAGCCCTGGGGAACAGACCTGCGCACAAACGACAGGAATCTCGGTGTGATAAAGGCTTTCTGCGGGCACTGCAGGCATCCATTGATGCTCTTCGGAAACTCGCTGAAATGCACAGAGTGCGGCAGCACTGAAACAAGAAAATTATCTGATGACTACGGAAAAGCCGAAGGCTTCGAATAA
PROTEIN sequence
Length: 188
MKIFLPGDFLATEEEFSTGENTFEENGSILADSQGTLLEDKSMKTVSIAKTKKITPLKIGSIIIGIVSFVKTNSVSIEISPMKKGAERQMVGGSYAMLPVRNVAEGYVKDLHAEFKIGDIIKAKISELKPWGTDLRTNDRNLGVIKAFCGHCRHPLMLFGNSLKCTECGSTETRKLSDDYGKAEGFE*