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S_p1_S3_coassembly_k141_1400603

Search features with annotation key words

Displaying items 31-60 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1400603_29
GWC2_OP11_40_12, Daviesbacteria, Microgenomates, Bacteria

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comp(19796..20524)
DNA (729bp) protein (243aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR42354.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWC2_40_12.;"
hypothetical protein PpeoK3_15416 bin=GWF2_OP3_38_59 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
membrane protein
S_p1_S3_coassembly_k141_1400603_30

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20836..21216
DNA (381bp) protein (127aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL83540.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
S_p1_S3_coassembly_k141_1400603_31
unknown

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comp(21367..22065)
DNA (699bp) protein (233aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1400603_32
unknown

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22150..22692
DNA (543bp) protein (181aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1400603_33
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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comp(22689..23201)
DNA (513bp) protein (171aa)
HIT family hydrolase Tax=Methanothermococcus thermolithotrophicus RepID=UPI000374068F
histidine triad (HIT) protein
Tax=CG_Aenigma_01
S_p1_S3_coassembly_k141_1400603_34
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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23314..24288
DNA (975bp) protein (325aa)
50S ribosomal protein L3 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZB8_METFV
50S ribosomal protein L3
Tax=CG_Aenigma_01
S_p1_S3_coassembly_k141_1400603_35
unknown

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24290..24529
DNA (240bp) protein (80aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1400603_36
unknown

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24586..25032
DNA (447bp) protein (149aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1400603_37
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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25034..25837
DNA (804bp) protein (268aa)
50S ribosomal protein L4P; K02930 large subunit ribosomal protein L4e bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
rpl4lp; 50S ribosomal protein L4
Tax=RBG_16_Micrarchaeota_36_9_curated
S_p1_S3_coassembly_k141_1400603_38
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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25843..26103
DNA (261bp) protein (87aa)
50S ribosomal protein L23 Tax=Thermococcus zilligii RepID=UPI00029AB74F
rpl23P; 50S ribosomal protein L23P
Tax=CG_Aenigma_01
S_p1_S3_coassembly_k141_1400603_39
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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26107..26811
DNA (705bp) protein (235aa)
50S ribosomal protein L2 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=RL2_PYRHO
rpl2p; 50S ribosomal protein L2
Tax=CG_Aenigma_01
S_p1_S3_coassembly_k141_1400603_40
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists


26843..27250
DNA (408bp) protein (136aa)
30S ribosomal protein S19P Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZC2_METFV
30S ribosomal protein s19
Tax=CG_Aenigma_01
S_p1_S3_coassembly_k141_1400603_41
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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27264..27620
DNA (357bp) protein (119aa)
50S ribosomal protein L22P bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Tax=RBG_16_Micrarchaeota_49_10_curated
S_p1_S3_coassembly_k141_1400603_42

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27659..28486
DNA (828bp) protein (276aa)
hypothetical protein bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO53188.1}; species="Archaea.;" source="archaeon GW2011_AR18.;"
hypothetical protein
S_p1_S3_coassembly_k141_1400603_43
unknown

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comp(28499..28807)
DNA (309bp) protein (103aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1400603_44

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28911..29519
DNA (609bp) protein (203aa)
30S ribosomal protein S3 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=RS3_METJA
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S3
S_p1_S3_coassembly_k141_1400603_45
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists


29565..29780
DNA (216bp) protein (72aa)
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
rpl29p; 50S ribosomal protein L29P
Tax=RBG_16_Micrarchaeota_49_10_curated
S_p1_S3_coassembly_k141_1400603_46
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

29783..30118
DNA (336bp) protein (112aa)
translation initiation factor 1 (eIF-1/SUI1); K03113 translation initiation factor 1 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
translation factor SUI1-like protein
Tax=CG_Aenigma_01
S_p1_S3_coassembly_k141_1400603_47
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

30135..30545
DNA (411bp) protein (137aa)
methionine-R-sulfoxide reductase (EC:1.8.4.12)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalobium.;" source="Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303).;"
Peptide methionine sulfoxide reductase MsrB Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E729_METEZ
S_p1_S3_coassembly_k141_1400603_48
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

30607..30891
DNA (285bp) protein (95aa)
ribonuclease p protein subunit rpp29 (EC:3.1.26.5)
Ribonuclease P protein component 1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZC7_METFV
Tax=CG_Aenigma_01
S_p1_S3_coassembly_k141_1400603_49
unknown

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31009..31545
DNA (537bp) protein (179aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1400603_50

Not on your lists


31668..31994
DNA (327bp) protein (109aa)
30S ribosomal protein S17P Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZC8_METFV
30S ribosomal protein S17P {ECO:0000313|EMBL:AJS12229.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S17
S_p1_S3_coassembly_k141_1400603_51

Not on your lists


31991..32392
DNA (402bp) protein (134aa)
50S ribosomal protein L14 Tax=Methanoregula boonei (strain 6A8) RepID=RL14_METB6
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl14p; 50S ribosomal protein L14
S_p1_S3_coassembly_k141_1400603_52

Not on your lists


32393..32872
DNA (480bp) protein (160aa)
50S ribosomal protein L24P Tax=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) RepID=RL24_METTH
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl24p; 50S ribosomal protein L24
S_p1_S3_coassembly_k141_1400603_53
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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32814..33491
DNA (678bp) protein (226aa)
30S ribosomal protein S4e Tax=Methanobacterium sp. MB1 RepID=U6EDM5_9EURY
rps4e; 30S ribosomal protein S4e
Tax=CG_Aenigma_01
S_p1_S3_coassembly_k141_1400603_54
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists


33492..33998
DNA (507bp) protein (169aa)
50S ribosomal protein L5 Tax=Methanotorris RepID=F6BD87_METIK bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L5
Tax=CG_Aenigma_01
S_p1_S3_coassembly_k141_1400603_55
unknown

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33982..34170
DNA (189bp) protein (63aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1400603_56
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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34329..35195
DNA (867bp) protein (289aa)
transmembrane_regions bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Peptidase A24A prepilin type IV
Tax=RBG_16_Micrarchaeota_49_10_curated
S_p1_S3_coassembly_k141_1400603_57
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(35172..35744)
DNA (573bp) protein (191aa)
Metal dependent phosphohydrolase Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CWS1_9ARCH
Metal dependent phosphohydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:AJW70886.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. NF5.;"
S_p1_S3_coassembly_k141_1400603_58
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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35808..36221
DNA (414bp) protein (138aa)
Putative uncharacterized protein Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N8S2_9ARCH
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ48691.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum subterraneum.;"
Displaying items 31-60 of 108 in total

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