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S_p1_S3_coassembly_k141_193841_5

Organism: S_p1_S3_coassembly_Woesearchaeota-I_38_69

partial RP 30 / 55 MC: 1 BSCG 19 / 51 ASCG 25 / 38
Location: 2427..2984

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium paludis (strain DSM 25820 / JCM 18151 / SWAN1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.0
  • Coverage: 182.0
  • Bit_score: 134
  • Evalue 1.50e-28
2'-5' RNA ligase Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D2K1_METSW similarity UNIREF
DB: UNIREF100
  • Identity: 39.0
  • Coverage: 182.0
  • Bit_score: 134
  • Evalue 1.00e-28
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 39.0
  • Coverage: 182.0
  • Bit_score: 134
  • Evalue 2.90e-29

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Taxonomy

Methanobacterium paludis → Methanobacterium → Methanobacteriales → Methanobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 558
ATGAAACGTTTGTTTGTTGCCGTGCCCGTTTCTGAAGGAATCAGAGATAAAATTAAGCCCATAGCACAAGCTCTTTCGGAAACGGATGCTGATTTGAAACTTGTTTCTCTTTCTAATCTTCATTTTACTTTGAAGTTCTTAGGAGACGTAGAAGAGAAGAATATTCCCGAGATAGAAAATAAGTTGGCCGGGATAGCCGAGAAAACAAAACGTTTTGAAGTTTCTGTCAAAAGTGTAGGCGTTTTTCCTTCTTTAGATAGAATTAGCGTAGTGTGGATTGGTGCAGAAAATTCTGAATTATTCTCCTTAATGAAAACAATTGGTAAAGAGCTAGATTTCATTAAGAAGAATGATCATGAAGAAGATGTTCCTCATTTGACTCTCGCGCGGGTTAAGACAAATAGGAATCAGAAAGAGTTGCAGGAGTTCGTGAAGAAATTTGAAAACACAGGATTTGGCAAAATGATGGTTGATAAATTAATTTTGTTTGAGAGTGAGTTGAGGAGAGAAGGAGCGGTATATAGAGTTATTAAAGGGTGGGAGTTAGGACAAACTTAA
PROTEIN sequence
Length: 186
MKRLFVAVPVSEGIRDKIKPIAQALSETDADLKLVSLSNLHFTLKFLGDVEEKNIPEIENKLAGIAEKTKRFEVSVKSVGVFPSLDRISVVWIGAENSELFSLMKTIGKELDFIKKNDHEEDVPHLTLARVKTNRNQKELQEFVKKFENTGFGKMMVDKLILFESELRREGAVYRVIKGWELGQT*