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S_p1_S3_coassembly_k141_861431

Search features with annotation key words

Displaying items 31-60 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_861431_31
unknown

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comp(27678..28571)
DNA (894bp) protein (298aa)

This feature has no annotations

S_p1_S3_coassembly_k141_861431_32

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comp(28593..29432)
DNA (840bp) protein (280aa)
Lytic transglycosylase catalytic Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EJZ8_RUNSL
Uncharacterized protein {ECO:0000313|EMBL:KHO55176.1}; species="Archaea.;" source="archaeon GW2011_AR19.;"
lytic transglycosylase
S_p1_S3_coassembly_k141_861431_33

Not on your lists

comp(29633..29965)
DNA (333bp) protein (111aa)
id=5048851 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO53920.1}; species="Archaea.;" source="archaeon GW2011_AR18.;"
hypothetical protein
S_p1_S3_coassembly_k141_861431_34
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(29962..30255)
DNA (294bp) protein (98aa)
Uncharacterized protein Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E8A2_METEZ bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Tax=AR20
S_p1_S3_coassembly_k141_861431_35
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(30252..30659)
DNA (408bp) protein (136aa)
Translation initiation factor 2 subunit beta Tax=Methanothermobacter RepID=IF2B_METTH bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Translation initiation factor 2 subunit beta
Tax=AR20
S_p1_S3_coassembly_k141_861431_36

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comp(30692..31366)
DNA (675bp) protein (225aa)
Uncharacterized protein conserved in archaea Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QHY8_9EURY bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62506.1}; species="Archaea.;" source="archaeon GW2011_AR20.;"
S_p1_S3_coassembly_k141_861431_37
Candidatus Parvarchaeum acidiphilum, Candidatus Parvarchaeum, Parvarchaeota, Archaea

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comp(31368..34532)
DNA (3165bp) protein (1055aa)
MCM family protein Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EFJ5_9EURY
MCM family protein {ECO:0000313|EMBL:EEZ92892.1}; species="Archaea; Parvarchaeota; Candidatus Parvarchaeum.;" source="Candidatus Parvarchaeum acidiphilum ARMAN-4.;"
DNA replication initiator Cdc21/Cdc54
S_p1_S3_coassembly_k141_861431_38
unknown

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comp(34605..35108)
DNA (504bp) protein (168aa)

This feature has no annotations

S_p1_S3_coassembly_k141_861431_39

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comp(35236..35787)
DNA (552bp) protein (184aa)
TATA-box-binding protein Tax=Candidatus Nanosalinarum sp. J07AB56 RepID=G0QBY9_9EURY bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
TATA-box-binding protein
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408, ECO:0000256|RuleBase:RU000523}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA-box factor {ECO:0000256|HAMAP-Rule:MF_00408}; species="Archaea.;" source="archaeon GW2011_AR20.;"
S_p1_S3_coassembly_k141_861431_40

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comp(35907..38702)
DNA (2796bp) protein (932aa)
Isoleucyl-tRNA synthetase {ECO:0000313|EMBL:KHO53928.1}; EC=6.1.1.5 {ECO:0000313|EMBL:KHO53928.1};; species="Archaea.;" source="archaeon GW2011_AR18.;"
isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
isoleucyl-tRNA synthetase
S_p1_S3_coassembly_k141_861431_41

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38892..39839
DNA (948bp) protein (316aa)
rfc; replication factor C small subunit; K04801 replication factor C small subunit bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Replication factor C small subunit, replication factor C small subunit {ECO:0000313|EMBL:KHO46156.1}; species="Archaea.;" source="archaeon GW2011_AR3.;"
Replication factor C small subunit
S_p1_S3_coassembly_k141_861431_42
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

39836..40402
DNA (567bp) protein (189aa)
hypothetical protein
id=5103217 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
S_p1_S3_coassembly_k141_861431_43
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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40380..41537
DNA (1158bp) protein (386aa)
Replication factor C large subunit bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Replication factor C large subunit
Tax=RBG_13_Pacearchaeota_33_26_curated
S_p1_S3_coassembly_k141_861431_44
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

41503..42153
DNA (651bp) protein (217aa)
nuclease precursor (EC:3.1.31.1)
Nuclease-like protein bin=GWE2_CPR3_35_7 species=ACD22 genus=ACD22 taxon_order=ACD22 taxon_class=ACD22 phylum=WWE3 tax=GWE2_CPR3_35_7 organism_group=CPR3 organism_desc=Good
Tax=AR17
S_p1_S3_coassembly_k141_861431_45
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

42192..42521
DNA (330bp) protein (110aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003629F02
replication factor A1
Tax=RBG_13_Pacearchaeota_36_9_curated
S_p1_S3_coassembly_k141_861431_46

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comp(42523..43371)
DNA (849bp) protein (283aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; species="Archaea.;" source="archaeon GW2011_AR16.;"
Protease HtpX homolog bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
protease
S_p1_S3_coassembly_k141_861431_47

Not on your lists

43469..44761
DNA (1293bp) protein (431aa)
Putative nucleotidyltransferase Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EER2_9EURY bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62494.1}; species="Archaea.;" source="archaeon GW2011_AR20.;"
S_p1_S3_coassembly_k141_861431_48

Not on your lists

44758..45324
DNA (567bp) protein (189aa)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; species="Archaea.;" source="archaeon GW2011_AR20.;"
Ribosomal RNA large subunit methyltransferase E Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E8N8_METEZ bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Ribosomal RNA large subunit methyltransferase E
S_p1_S3_coassembly_k141_861431_49

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comp(45312..46130)
DNA (819bp) protein (273aa)
Putative uncharacterized protein Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RGW9_ARCPA bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62491.1}; species="Archaea.;" source="archaeon GW2011_AR20.;"
S_p1_S3_coassembly_k141_861431_50
unknown

Not on your lists

46158..47414
DNA (1257bp) protein (419aa)

This feature has no annotations

S_p1_S3_coassembly_k141_861431_51
unknown

Not on your lists

47416..47688
DNA (273bp) protein (91aa)

This feature has no annotations

S_p1_S3_coassembly_k141_861431_52
unknown

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comp(47668..47961)
DNA (294bp) protein (98aa)

This feature has no annotations

S_p1_S3_coassembly_k141_861431_53
AR18, Woesearchaeaota, DPANN, Archaea

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comp(47963..48568)
DNA (606bp) protein (202aa)
id=5048867 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
S_p1_S3_coassembly_k141_861431_54
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(48603..49022)
DNA (420bp) protein (140aa)
hypothetical protein
id=5103206 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
S_p1_S3_coassembly_k141_861431_55

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comp(49075..50091)
DNA (1017bp) protein (339aa)
Flap endonuclease 1 {ECO:0000256|HAMAP-Rule:MF_00614}; Short=FEN-1 {ECO:0000256|HAMAP-Rule:MF_00614};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00614};; Flap structure-specific endonuclease 1 {ECO:0000256|HAMAP-Rule:MF_00614}; species="Archaea.;" source="archaeon GW2011_AR20.;"
Flap endonuclease 1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AGN5_PYRYC bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Flap endonuclease 1
S_p1_S3_coassembly_k141_861431_56

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50161..50805
DNA (645bp) protein (215aa)
hypothetical protein
id=5103202 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF62483.1}; species="Archaea.;" source="archaeon GW2011_AR20.;"
S_p1_S3_coassembly_k141_861431_57
unknown

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comp(50830..51291)
DNA (462bp) protein (154aa)

This feature has no annotations

S_p1_S3_coassembly_k141_861431_58

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comp(51350..52600)
DNA (1251bp) protein (417aa)
Integrase catalytic region bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Integrase catalytic region {ECO:0000313|EMBL:KHO53516.1}; species="Archaea.;" source="archaeon GW2011_AR18.;"
Integrase catalytic region
S_p1_S3_coassembly_k141_861431_59
unknown

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comp(52635..52757)
DNA (123bp) protein (41aa)

This feature has no annotations

S_p1_S3_coassembly_k141_861431_60
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

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52920..55622
DNA (2703bp) protein (901aa)
ligA; NAD-dependent DNA ligase LigA (EC:6.5.1.2)
Putative restriction endonuclease, N6_Mtase domain protein bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
Tax=GWA2_Bacteroidetes_32_17_curated
Displaying items 31-60 of 63 in total

View Taxonomy