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S_p1_S3_coassembly_k141_86965

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Displaying items 31-51 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_86965_31

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comp(22305..22871)
DNA (567bp) protein (189aa)
hypothetical protein
id=5103004 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF62285.1}; species="Archaea.;" source="archaeon GW2011_AR20.;"
S_p1_S3_coassembly_k141_86965_32
GWB1_OP11_39_12, Woesebacteria, Microgenomates, Bacteria

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22979..23749
DNA (771bp) protein (257aa)
IS1341-type transposase (TCE31) Tax=Natronorubrum bangense JCM 10635 RepID=L9W1S9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KKR01677.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWB1_39_12.;"
transposase, IS605 OrfB family, central region
S_p1_S3_coassembly_k141_86965_33
AR20, Woesearchaeaota, DPANN, Archaea

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24102..24770
DNA (669bp) protein (223aa)
TraB family protein Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VSP1_METIM bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
TraB family protein
Tax=AR20
S_p1_S3_coassembly_k141_86965_34
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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24763..25467
DNA (705bp) protein (235aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000370CCDC
hypothetical protein
Tax=RBG_13_Woesearchaeota_36_6_curated
S_p1_S3_coassembly_k141_86965_35
unknown

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25475..25765
DNA (291bp) protein (97aa)

This feature has no annotations

S_p1_S3_coassembly_k141_86965_36

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25789..27294
DNA (1506bp) protein (502aa)
Helicase domain protein Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KQU8_ARCVS bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Helicase protein
Helicase protein {ECO:0000313|EMBL:AJF62386.1}; species="Archaea.;" source="archaeon GW2011_AR20.;"
S_p1_S3_coassembly_k141_86965_37
AR13, Pacearchaeaota, DPANN, Archaea

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comp(27296..27928)
DNA (633bp) protein (211aa)
MgtC family protein Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11P18_CYTH3
mgtC; MgtC family protein
Tax=AR13
S_p1_S3_coassembly_k141_86965_38
AR9, Woesearchaeaota, DPANN, Archaea

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comp(27954..28664)
DNA (711bp) protein (237aa)
id=5041731 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR9
S_p1_S3_coassembly_k141_86965_39

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28771..29781
DNA (1011bp) protein (337aa)
Transcription regulator TrmB, N-terminal bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO47984.1}; species="Archaea.;" source="archaeon GW2011_AR4.;"
Transcriptional regulator
S_p1_S3_coassembly_k141_86965_40

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29756..30415
DNA (660bp) protein (220aa)
DEAD/DEAH box helicase domain protein Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZK2_METFV bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DEAD/DEAH box helicase protein
DEAD/DEAH box helicase protein {ECO:0000313|EMBL:AJF62385.1}; species="Archaea.;" source="archaeon GW2011_AR20.;"
S_p1_S3_coassembly_k141_86965_41
unknown

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comp(30421..30810)
DNA (390bp) protein (130aa)

This feature has no annotations

S_p1_S3_coassembly_k141_86965_42
R_OD1_Yanofskybacteria_41_11, Yanofskybacteria, Parcubacteria, Bacteria

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30972..31361
DNA (390bp) protein (130aa)
id=1837087 bin=GWE2_Bacteroidetes_40_15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_41_11_curated
S_p1_S3_coassembly_k141_86965_43

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comp(31515..32054)
DNA (540bp) protein (180aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; species="Archaea.;" source="archaeon GW2011_AR20.;"
2'-5' RNA ligase Tax=Thermococcus litoralis DSM 5473 RepID=H3ZRC7_THELI bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
2'-5' RNA ligase
S_p1_S3_coassembly_k141_86965_44
AR18, Woesearchaeaota, DPANN, Archaea

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comp(32057..33175)
DNA (1119bp) protein (373aa)
proteasome-activating nucleotidase; K03420 proteasome regulatory subunit bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
proteasome-activating nucleotidase
Tax=AR18
S_p1_S3_coassembly_k141_86965_45

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comp(33216..34229)
DNA (1014bp) protein (338aa)
Tyrosine--tRNA ligase {ECO:0000256|SAAS:SAAS00011232}; EC=6.1.1.1 {ECO:0000256|SAAS:SAAS00011232};; species="Archaea.;" source="archaeon GW2011_AR20.;"
Tyrosyl-tRNA synthetase Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EG16_9EURY bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tyrosyl-tRNA synthetase
S_p1_S3_coassembly_k141_86965_46
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

34333..34680
DNA (348bp) protein (116aa)
hypothetical protein
id=5103098 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
S_p1_S3_coassembly_k141_86965_47
unknown

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comp(34861..35148)
DNA (288bp) protein (96aa)

This feature has no annotations

S_p1_S3_coassembly_k141_86965_48
unknown

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comp(35359..35619)
DNA (261bp) protein (87aa)

This feature has no annotations

S_p1_S3_coassembly_k141_86965_49
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(35934..41288)
DNA (5355bp) protein (1785aa)
Putative lipoprotein Tax=Plesiocystis pacifica SIR-1 RepID=A6G646_9DELT
hypothetical protein
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
S_p1_S3_coassembly_k141_86965_50
unknown

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comp(41285..41800)
DNA (516bp) protein (172aa)

This feature has no annotations

S_p1_S3_coassembly_k141_86965_51
CG_Pacearch_05, Pacearchaeota, Archaea

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comp(41833..43935)
DNA (2103bp) protein (701aa)
DNA polymerase II large subunit (EC:2.7.7.7)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037716FE
Tax=CG_Pacearch_05
Displaying items 31-51 of 51 in total

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