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S_p2_S4_coassembly_k141_1642492_9

Organism: S_p2_S4_coassembly_Aenigmarchaeota_49_229

near complete RP 33 / 55 MC: 3 BSCG 20 / 51 ASCG 35 / 38 MC: 1
Location: comp(6438..7016)

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Pyrobaculum.;" source="Pyrobaculum neutrophilum (strain DSM 2338 / JCM 9278 / V24Sta); (Thermoproteus neutrophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.8
  • Coverage: 179.0
  • Bit_score: 141
  • Evalue 7.30e-31
2'-5' RNA ligase Tax=Pyrobaculum neutrophilum (strain DSM 2338 / JCM 9278 / V24Sta) RepID=B1Y9T5_PYRNV similarity UNIREF
DB: UNIREF100
  • Identity: 40.8
  • Coverage: 179.0
  • Bit_score: 141
  • Evalue 5.20e-31
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 40.8
  • Coverage: 179.0
  • Bit_score: 141
  • Evalue 1.50e-31

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Taxonomy

Pyrobaculum neutrophilum → Pyrobaculum → Thermoproteales → Thermoprotei → Crenarchaeota → Archaea

Sequences

DNA sequence
Length: 579
GTGATTCTGACGCAAAATAGATGTTTTTTGGCCATAGACATAGATAGTCACGTGAAGGTTAACGTGAAGGTAACGCAAGATCACGTGAAGGAAAGTGAAGCTGACGTGAAGGTTGTTGAGCCCGAAAACCTGCATTTTACGGTCAAATTCCTAGGTAATGTGGACGAGAGTGCGGTGAAGAGGATAATCGGAGTGTTAACGCCCCTTCTAGAGGGCGAAAAGTCTTCGAAAGTGAGTGTTAAGGGGGTTGGTTTCTTCGGCCATATGAAGGCGCCCAGGGTCTTGTGGGTTGGTGTTGGTGAAGGAAAAACGTATATTGAAGGGATTTTTAGCAAAATTTCGGCAAAACTTGAGGAAATTGGCATCAAATCCGATGGGAAAGAGGCTGTTCCCCACATCACAGTAGGGCGTGTCAGGTCAGGAAGGAATATAAACAAGCTCGAAGAAATAATACTAAAGGAACGTGAGACTTTATACGGGGAAACCCTGATAGATGCGGTAAAATTAAAGTCGAGTGTCCTGACGCCAAGAGGTCCGCGATACGTGGATGTCGCGAGTTTTCCTCTCAAGAAGCAATAA
PROTEIN sequence
Length: 193
VILTQNRCFLAIDIDSHVKVNVKVTQDHVKESEADVKVVEPENLHFTVKFLGNVDESAVKRIIGVLTPLLEGEKSSKVSVKGVGFFGHMKAPRVLWVGVGEGKTYIEGIFSKISAKLEEIGIKSDGKEAVPHITVGRVRSGRNINKLEEIILKERETLYGETLIDAVKLKSSVLTPRGPRYVDVASFPLKKQ*