ggKbase home page

S_p2_S4_coassembly_k141_2766918_22

Organism: S_p2_S4_coassembly_Diapherotrites_52_80

near complete RP 30 / 55 MC: 5 BSCG 17 / 51 ASCG 35 / 38
Location: comp(21376..22443)

Top 3 Functional Annotations

Value Algorithm Source
Marine sediment metagenome DNA, contig: S01H1_L05969 {ECO:0000313|EMBL:GAF69391.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.2
  • Coverage: 325.0
  • Bit_score: 330
  • Evalue 2.00e-87
mechanosensitive ion channel protein MscS bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome similarity UNIREF
DB: UNIREF100
  • Identity: 43.1
  • Coverage: 355.0
  • Bit_score: 313
  • Evalue 2.40e-82
MscS Mechanosensitive ion channel similarity KEGG
DB: KEGG
  • Identity: 43.6
  • Coverage: 346.0
  • Bit_score: 296
  • Evalue 8.60e-78

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 1068
GTGATAAACATTTCTTTCGTAGACATTCTGTTGCAGGCCTCAGTTTTCGGGATAGAGTTCCGGAGCCTGCTGGCCGCCGCAGCCGTTTTCGTTGTTGTTTACGCTGCACTCTGGCTGACCTCGAGGCTCTTCATTTCTCGCCTGAGGAAAATCGCCGAGAAGACGCACCACAAGATAGACGATGCCATTGTGGACGCCATCATGGAGGTGAAATCGCCGGCTTACCTGCTGCTTTCGCTCTATGCGGCAGTCCAGTTCATTGCGGTCCCGGAATTCATTGTGGATTTCACAAGGGTTGCAGTGCTCGCGGTGGTTGCCTTCTATGCCGTCAGGATGTTGCAAAAGCTACTATTGTTCTTCACGAACGAGTATATTGAGAAGCAGCCAGAGGCCCGAAAGCGCGACCCATCCATAATAATGTTCGCCTCAAAAGCGGCTTCGTTCCTGCTCTGGCTCCTTGCGTTCCTGCTGGTGATTGACAATGCAGGCTACGACATCAGCGCGCTGGTCGCCGGCCTTGGCGTTGCAGGAATCGCCGTGGCGCTTGCAGTGCAGAACATTTTGGGGGATATGTTCAGCTCTCTTTCCATTTATTTTGACAAGCCATTCAAGGCGGGCGACTTCATAATAGTCGGCAGCGAAATGGGCACGGTAAAGAAAATAGGCATAAAGACCACGCGCATAGACGCCCTCCAAGGCGAAGAAATAGTAATCTCCAACAAGGAGCTCACCGAGTCAAGGATACACAACTTCGGGAAAATGAGCAAAAGGCGCGTCCAGTTCGGCTTCGGCATACTCTACGAAACGCCCCTCCAGAAAGTAAAAAAGGTCAATGAGCTTGTCAAGAAAAGCGTTGAAAAGGTCGAAGGTGCGACCCTCGACCGCGCACACTTCAAAACCTTTGGTGATTCCTCACTCCAGTTCGAGGTCGTCTATTATGTCCCTACTGGAGACTACAACAAGTACATGGACGCGCAGCAGGCAATAAATCACTCGCTCATGGAGCTTTTCAGGAAAGAGGGAATAGAATTCGCCTACCCGACACAAAAAATATACCTTGCCAAATGA
PROTEIN sequence
Length: 356
VINISFVDILLQASVFGIEFRSLLAAAAVFVVVYAALWLTSRLFISRLRKIAEKTHHKIDDAIVDAIMEVKSPAYLLLSLYAAVQFIAVPEFIVDFTRVAVLAVVAFYAVRMLQKLLLFFTNEYIEKQPEARKRDPSIIMFASKAASFLLWLLAFLLVIDNAGYDISALVAGLGVAGIAVALAVQNILGDMFSSLSIYFDKPFKAGDFIIVGSEMGTVKKIGIKTTRIDALQGEEIVISNKELTESRIHNFGKMSKRRVQFGFGILYETPLQKVKKVNELVKKSVEKVEGATLDRAHFKTFGDSSLQFEVVYYVPTGDYNKYMDAQQAINHSLMELFRKEGIEFAYPTQKIYLAK*