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S_p2_S4_coassembly_k141_1134884

Search features with annotation key words

Displaying items 31-60 of 88 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_1134884_30
AR11, Woesearchaeaota, DPANN, Archaea

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comp(24443..25348)
DNA (906bp) protein (302aa)
Putative uncharacterized protein bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
hypothetical protein
Tax=AR11
S_p2_S4_coassembly_k141_1134884_31
RLO_Planctomycetes_39_13, Planctomycetes, Bacteria

Not on your lists

25474..27294
DNA (1821bp) protein (607aa)
glucosamine--fructose-6-phosphate aminotransferase (isomerizing) (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] Tax=planctomycete KSU-1 RepID=I3IHH6_9PLAN
Tax=RIFCSPLOWO2_12_FULL_Planctomycetes_39_13_curated
S_p2_S4_coassembly_k141_1134884_32

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27291..27788
DNA (498bp) protein (166aa)
Uncharacterized protein Tax=uncultured bacterium 405006-B04 RepID=S4W813_9BACT
N-acetyltransferase GCN5 {ECO:0000313|EMBL:KHO49311.1}; species="Archaea.;" source="archaeon GW2011_AR11.;"
S_p2_S4_coassembly_k141_1134884_33
unknown

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comp(27926..28501)
DNA (576bp) protein (192aa)

This feature has no annotations

S_p2_S4_coassembly_k141_1134884_34

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comp(28716..29504)
DNA (789bp) protein (263aa)
Uncharacterized membrane protein bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46769.1}; species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
S_p2_S4_coassembly_k141_1134884_35

Not on your lists

comp(29504..30223)
DNA (720bp) protein (240aa)
tRNA (adenine-N(1)-)-methyltransferase (EC:2.1.1.36); K07442 tRNA (adenine57-N1/adenine58-N1)-methyltransferase [EC:2.1.1.219 2.1.1.220] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
tRNA (Adenine57-N1/adenine58-N1)-methyltransferase {ECO:0000313|EMBL:KHO45938.1}; EC=2.1.1.219 {ECO:0000313|EMBL:KHO45938.1};; species="Archaea.;" source="archaeon GW2011_AR3.;"
tRNA(1-methyladenosine) methyltransferase
S_p2_S4_coassembly_k141_1134884_36
AR20, Woesearchaeaota, DPANN, Archaea

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comp(30220..31467)
DNA (1248bp) protein (416aa)
Transporter, monovalent cation:proton antiporter-2 family protein Tax=Carnobacterium maltaromaticum LMA28 RepID=K8E279_CARML bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Transporter, monovalent cation:proton antiporter-2 family protein
Tax=AR20
S_p2_S4_coassembly_k141_1134884_trna_1
unknown

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comp(31609..31712)
DNA (104bp)
transferRNA Arg
S_p2_S4_coassembly_k141_1134884_37
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(31915..33009)
DNA (1095bp) protein (365aa)
type 2 DNA topoisomerase 6 subunit A (EC:5.99.1.3)
Type 2 DNA topoisomerase 6 subunit A bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=RBG_13_Woesearchaeota_36_6_curated
S_p2_S4_coassembly_k141_1134884_38

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comp(32990..34627)
DNA (1638bp) protein (546aa)
top6B; DNA topoisomerase VI subunit B (EC:5.99.1.3); K03167 DNA topoisomerase VI subunit B [EC:5.99.1.3] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Type 2 DNA topoisomerase 6 subunit B {ECO:0000256|HAMAP-Rule:MF_00322}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00322};; Type II DNA topoisomerase VI subunit B {ECO:0000256|HAMAP-Rule:MF_00322}; species="Archaea.;" source="archaeon GW2011_AR3.;"
DNA topoisomerase VI, subunit B
S_p2_S4_coassembly_k141_1134884_39

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comp(34624..35166)
DNA (543bp) protein (181aa)
Ribosomal RNA assembly protein {ECO:0000313|EMBL:KHO50505.1}; species="Archaea.;" source="archaeon GW2011_AR11.;"
KH domain protein; K06961 ribosomal RNA assembly protein bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
KH domain protein
S_p2_S4_coassembly_k141_1134884_40

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comp(35218..35916)
DNA (699bp) protein (233aa)
RIO kinase 1 {ECO:0000313|EMBL:KHO50185.1}; EC=2.7.11.1 {ECO:0000313|EMBL:KHO50185.1};; species="Archaea.;" source="archaeon GW2011_AR9.;"
Non-specific serine/threonine protein kinase; K07178 RIO kinase 1 [EC:2.7.11.1] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Non-specific serine/threonine protein kinase
S_p2_S4_coassembly_k141_1134884_41
unknown

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36036..36971
DNA (936bp) protein (312aa)

This feature has no annotations

S_p2_S4_coassembly_k141_1134884_42

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36987..38201
DNA (1215bp) protein (405aa)
SxtL {ECO:0000313|EMBL:KKT79232.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_44_8b.;"
hypothetical protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin1_lowGC organism_group=Unknown_CP
S_p2_S4_coassembly_k141_1134884_43
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

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38491..38703
DNA (213bp) protein (71aa)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
S_p2_S4_coassembly_k141_1134884_44

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38709..39038
DNA (330bp) protein (110aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51049.1}; species="Archaea.;" source="archaeon GW2011_AR16.;"
id=4744551 bin=GWC2_OP3_44_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
S_p2_S4_coassembly_k141_1134884_45
unknown

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comp(39044..39532)
DNA (489bp) protein (163aa)

This feature has no annotations

S_p2_S4_coassembly_k141_1134884_46

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39933..41201
DNA (1269bp) protein (423aa)
DNA primase DnaG {ECO:0000256|HAMAP-Rule:MF_00007, ECO:0000256|SAAS:SAAS00020821}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00007, ECO:0000256|SAAS:SAAS00020820};; species="Archaea.;" source="archaeon GW2011_AR11.;"
DNA primase bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
S_p2_S4_coassembly_k141_1134884_47
R_OD1_Yanofskybacteria_44_17, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

41235..41678
DNA (444bp) protein (148aa)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_44_17_curated
S_p2_S4_coassembly_k141_1134884_48
GWF2_OP11_38_6, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(41842..42798)
DNA (957bp) protein (319aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ76423.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWF2_38_6.;"
S_p2_S4_coassembly_k141_1134884_49

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comp(42802..44070)
DNA (1269bp) protein (423aa)
Foldase protein PrsA Tax=Anaerococcus tetradius ATCC 35098 RepID=C2CFJ9_9FIRM
Marine sediment metagenome DNA, contig: S01H1_L05708 {ECO:0000313|EMBL:GAF67311.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PpiC-type peptidyl-prolyl cis-trans isomerase
S_p2_S4_coassembly_k141_1134884_50
CG_Woesearch_03, Woesearchaeota, Archaea

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44322..45635
DNA (1314bp) protein (438aa)
nucleotidyltransferase; K06915 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=CG_Woesearch_03
S_p2_S4_coassembly_k141_1134884_51
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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45845..46135
DNA (291bp) protein (97aa)
seg bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=RBG_13_Woesearchaeota_36_6_curated
S_p2_S4_coassembly_k141_1134884_52
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(46136..46336)
DNA (201bp) protein (67aa)
Tax=CG_Woesearch_02
S_p2_S4_coassembly_k141_1134884_53
unknown

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comp(46435..46665)
DNA (231bp) protein (77aa)

This feature has no annotations

S_p2_S4_coassembly_k141_1134884_54
AR10, Diapherotrites, DPANN, Archaea

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comp(46707..47786)
DNA (1080bp) protein (360aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
tryptophanyl-tRNA synthetase; K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p2_S4_coassembly_k141_1134884_55
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(47815..48456)
DNA (642bp) protein (214aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase Tax=Clostridium sp. CAG:678 RepID=R5L1F7_9CLOT
Tax=AR11
S_p2_S4_coassembly_k141_1134884_56
unknown

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48547..49068
DNA (522bp) protein (174aa)

This feature has no annotations

S_p2_S4_coassembly_k141_1134884_57
Methanothermobacter marburgensis, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(49057..49866)
DNA (810bp) protein (270aa)
trpA; tryptophan synthase, alpha subunit (EC:4.2.1.20)
Tryptophan synthase alpha chain {ECO:0000255|HAMAP-Rule:MF_00131}; EC=4.2.1.20 {ECO:0000255|HAMAP-Rule:MF_00131};; species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter.;" source="Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC; 100331 / OCM 82 / Marburg) (Methanobacterium thermoautotrophicum).;"
Tryptophan synthase alpha chain Tax=Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) RepID=TRPA_METTM
S_p2_S4_coassembly_k141_1134884_58
R_RIF_OD107_43_32, RIF-OD1-7, Parcubacteria, Bacteria

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comp(49844..51022)
DNA (1179bp) protein (393aa)
Tryptophan synthase beta chain Tax=Methanobacterium formicicum DSM 3637 RepID=K2RTW1_METFO
trpB; tryptophan synthase beta subunit TrpB
Tax=RIFCSPLOWO2_01_FULL_RIF_OD107_43_32_curated
Displaying items 31-60 of 88 in total

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