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S_p2_S4_coassembly_k141_2015005

Search features with annotation key words

Displaying items 31-53 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_2015005_30

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20670..22166
DNA (1497bp) protein (499aa)
Glycyl-tRNA synthetase {ECO:0000313|EMBL:KHO50626.1}; EC=6.1.1.14 {ECO:0000313|EMBL:KHO50626.1};; species="Archaea.;" source="archaeon GW2011_AR16.;"
glycyl-tRNA synthetase (EC:6.1.1.14)
Glycyl-tRNA synthetase bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
S_p2_S4_coassembly_k141_2015005_31
unknown

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22185..23165
DNA (981bp) protein (327aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2015005_32

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23198..23530
DNA (333bp) protein (111aa)
single-stranded DNA-binding replication protein A, large (70 kD) subunit; K07466 replication factor A1 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Replication factor A1 {ECO:0000313|EMBL:KHO45514.1}; species="Archaea.;" source="archaeon GW2011_AR3.;"
replication factor A1
S_p2_S4_coassembly_k141_2015005_33

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comp(23882..26041)
DNA (2160bp) protein (720aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO52160.1}; species="Archaea.;" source="archaeon GW2011_AR11.;"
hypothetical protein bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
S_p2_S4_coassembly_k141_2015005_34
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

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comp(26119..26502)
DNA (384bp) protein (128aa)
Putative uncharacterized protein bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
hypothetical protein
Tax=RIFOXYC12_FULL_TA06_54_24_curated
S_p2_S4_coassembly_k141_2015005_35
CG_Woesearch_03, Woesearchaeota, Archaea

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26627..27454
DNA (828bp) protein (276aa)
high-affinity iron transporter; K07243 high-affinity iron transporter bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
high-affinity iron transporter
Tax=CG_Woesearch_03
S_p2_S4_coassembly_k141_2015005_36
unknown

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27473..27931
DNA (459bp) protein (153aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2015005_37

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comp(27928..28401)
DNA (474bp) protein (158aa)
Transcription regulator, Lrp/AsnC family bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Transcription regulator, Lrp/AsnC family {ECO:0000313|EMBL:KHO44986.1}; species="Archaea.;" source="archaeon GW2011_AR3.;"
AsnC family transcriptional regulator
S_p2_S4_coassembly_k141_2015005_38
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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28527..29939
DNA (1413bp) protein (471aa)
L-glutamine synthetase (EC:6.3.1.2)
Glutamine synthetase bin=GWD2_Deltaproteobacteria_55_8 species=Leptospirillum ferrodiazotrophum genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=GWD2_Deltaproteobacteria_55_8_curated
S_p2_S4_coassembly_k141_2015005_39
CG_Pacearch_02, Pacearchaeota, Archaea

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comp(29958..30578)
DNA (621bp) protein (207aa)
Uncharacterized protein Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A3H3_NITMS
conserved membrane protein of unknown function
Tax=CG_Pacearch_02
S_p2_S4_coassembly_k141_2015005_40
unknown

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30877..31248
DNA (372bp) protein (124aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2015005_41
Parcubacteria bacterium GW2011_GWA2_48_9, Parcubacteria, Bacteria

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comp(31241..32230)
DNA (990bp) protein (330aa)
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:KKU99850.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_48_9.;"
Transcriptional regulator
Transcriptional regulator bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
S_p2_S4_coassembly_k141_2015005_42
unknown

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32382..32831
DNA (450bp) protein (150aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2015005_43

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comp(32839..35118)
DNA (2280bp) protein (760aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO52161.1}; species="Archaea.;" source="archaeon GW2011_AR11.;"
hypothetical protein bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
S_p2_S4_coassembly_k141_2015005_44

Not on your lists

35402..35836
DNA (435bp) protein (145aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO52163.1}; species="Archaea.;" source="archaeon GW2011_AR11.;"
id=5048513 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
S_p2_S4_coassembly_k141_2015005_45
Capnocytophaga canimorsus, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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35948..36502
DNA (555bp) protein (185aa)
Putative acetyltransferase yjbC {ECO:0000313|EMBL:CEN39255.1}; EC=2.3.1.- {ECO:0000313|EMBL:CEN39255.1};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga canimorsus.;"
putative acetyltransferase yjbC (EC:2.3.1.-)
Putative acetyltransferase yjbC Tax=Capnocytophaga canimorsus (strain 5) RepID=F9YV57_CAPCC
S_p2_S4_coassembly_k141_2015005_46

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36670..37236
DNA (567bp) protein (189aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51138.1}; species="Archaea.;" source="archaeon GW2011_AR11.;"
hypothetical protein bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
S_p2_S4_coassembly_k141_2015005_47
AR11, Woesearchaeaota, DPANN, Archaea

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comp(37264..37767)
DNA (504bp) protein (168aa)
transmembrane_regions bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=AR11
S_p2_S4_coassembly_k141_2015005_48
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(37769..38377)
DNA (609bp) protein (203aa)
transmembrane_regions bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=AR11
S_p2_S4_coassembly_k141_2015005_49
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(38446..39003)
DNA (558bp) protein (186aa)
seg bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=RBG_13_Woesearchaeota_36_6_curated
S_p2_S4_coassembly_k141_2015005_50
CG_Woesearch_02, Woesearchaeota, Archaea

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39102..39686
DNA (585bp) protein (195aa)
hypothetical protein bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
haloacid dehalogenase superfamily protein
Tax=CG_Woesearch_02
S_p2_S4_coassembly_k141_2015005_51

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39683..41917
DNA (2235bp) protein (745aa)
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:KHO51309.1}; EC=6.1.1.12 {ECO:0000313|EMBL:KHO51309.1};; species="Archaea.;" source="archaeon GW2011_AR11.;"
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12); K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
S_p2_S4_coassembly_k141_2015005_52
Methanopyrus kandleri, Methanopyrus, Methanopyrales, Methanopyri, Euryarchaeota, Archaea

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41928..42128
DNA (201bp) protein (67aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000255|HAMAP-Rule:MF_01405}; EC=3.6.1.19 {ECO:0000255|HAMAP-Rule:MF_01405};; Non-standard purine NTP pyrophosphatase {ECO:0000255|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000255|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000255|HAMAP-Rule:MF_01405}; Short=NTPase {ECO:0000255|HAMAP-Rule:MF_01405};; species="Archaea; Euryarchaeota; Methanopyri; Methanopyrales; Methanopyraceae; Methanopyrus.;" source="Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC; 100938).;"
Non-canonical purine NTP pyrophosphatase Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=NTPA_METKA
xanthosine triphosphate pyrophosphatase
Displaying items 31-53 of 53 in total

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