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S35_SO-1_scaffold_892_5

Organism: Genasci_Feb2018_S35_SO-1_Woesearchaeota-I_35_31

near complete RP 31 / 55 MC: 2 BSCG 20 / 51 ASCG 33 / 38
Location: 3153..3812

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix, Fis-type id=5043985 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18 similarity UNIREF
DB: UNIREF100
  • Identity: 41.3
  • Coverage: 213.0
  • Bit_score: 139
  • Evalue 2.90e-30
sigma-54 factor interaction domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 27.3
  • Coverage: 99.0
  • Bit_score: 53
  • Evalue 4.60e-05
Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 54.2
  • Coverage: 216.0
  • Bit_score: 233
  • Evalue 2.10e-58

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Taxonomy

RLO_OD1_Giovannonibacteria_43_11c → Giovannonibacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 660
ATGGAAAAGATAAAATCTAAGCAAAATTTAGAGGAAGCGATCAAAGAGAAAGTTTTACCGTTGTTAGAAGAAACTATGGAAAAAAGCTGGGGGGTTACGATACCGAAAATTGAGCAGGATATTTCCGATAAATTATCCCGACCGGGATTGAATTTTTATGTTGCTTCAGGTACAAGTTTGGATAAGGCGAAGAAGAAGTTTAAACAAGAATTTTTGAAGAGAGAATTGCAACAACATGAAGGCAATGTTTCACAGTTAGCAAAAATGCTGGGTGTGGATAGGCGCAGTATACATCGAGCGGTTAAAGCGTTTGATATTGATGTTAAAGTTTATCGCGCCGGATTAGATATAGAAAATTATCAGGAGAAAGTTGTTGATCAAACTATAAGAAATACACTAGAGCAATATAAAGAAATTCTTCAGCCGAGCAAGTTAGAAAATATGTATAAGGAGCTGCCGGAATTGTCTAAGAATATTGCTAAGGTTTTACCTCCAGAAATTATGACGTGGAAGGAGGCGGAGAGAGAGTTTGAGAAGCAGTTATTTTTACAGGTATTAGATGAGAATGAGGGGAAGGTTGGAGAGACAGCTAGGAAATTAAAGATAAGGATTGAAACGTTACAGAGGAAGATGAAGAAGCTGGGAATAGGGAGGAGGTAG
PROTEIN sequence
Length: 220
MEKIKSKQNLEEAIKEKVLPLLEETMEKSWGVTIPKIEQDISDKLSRPGLNFYVASGTSLDKAKKKFKQEFLKRELQQHEGNVSQLAKMLGVDRRSIHRAVKAFDIDVKVYRAGLDIENYQEKVVDQTIRNTLEQYKEILQPSKLENMYKELPELSKNIAKVLPPEIMTWKEAEREFEKQLFLQVLDENEGKVGETARKLKIRIETLQRKMKKLGIGRR*