ggKbase home page

S35_SO-1_scaffold_241890_29

Organism: Genasci_Feb2018_S35_SO-1_Woesearchaeota-II_31_12

near complete RP 32 / 55 MC: 1 BSCG 22 / 51 ASCG 31 / 38
Location: comp(23303..23821)

Top 3 Functional Annotations

Value Algorithm Source
Marine sediment metagenome DNA, contig: S01H1_L06225 {ECO:0000313|EMBL:GAF73174.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.0
  • Coverage: 169.0
  • Bit_score: 172
  • Evalue 2.60e-40
transcription factor E; K03136 transcription initiation factor TFIIE subunit alpha id=5041815 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18 similarity UNIREF
DB: UNIREF100
  • Identity: 46.4
  • Coverage: 166.0
  • Bit_score: 171
  • Evalue 5.50e-40
Transcription factor E similarity KEGG
DB: KEGG
  • Identity: 43.7
  • Coverage: 158.0
  • Bit_score: 149
  • Evalue 6.30e-34

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 519
ATGATAATAATGAAATTGACAGACAGGCAGACAGAAGAGCTGATGAAAGAGCTTTATGGGAAGGAAATATTACCTTTAATTAAGCTCTTTAAGGGCAAGAAAAACATAAATGAGTTCAAGATAGCTGAAAAGTTAAAATTAACAATAAACCAAGTCAGAAATATGTTCTATAAGTTACAAGAAAGAAGCTTGGTGTCATTTACCAGAAAAAAAGACAAGAAAAAGGGATGGTATGTCTATTACTGGACATTTAATGACAAAGAAGCTAAGAATTTAATAATCTCCCATAAGCAGAAGAAGTTAGATGAGCTAAATGAGCTATTGGCTAGGGAAAAAGAAGTTAATTATTTCTTATGCAAGGACAAGCATGTAAGGATGAGATATGATGAAGCTATGGACAATGACTTTAGATGCCCTGAGTGCGGGGAGTTATTGATACAAGAGGATAAAGAGAGGATTTTAAGGGCAATAAAGAAAGAAATAGACATTATTGAGAAAGAGATTAAGGTTAAATCTTAA
PROTEIN sequence
Length: 173
MIIMKLTDRQTEELMKELYGKEILPLIKLFKGKKNINEFKIAEKLKLTINQVRNMFYKLQERSLVSFTRKKDKKKGWYVYYWTFNDKEAKNLIISHKQKKLDELNELLAREKEVNYFLCKDKHVRMRYDEAMDNDFRCPECGELLIQEDKERILRAIKKEIDIIEKEIKVKS*