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S35_SO-1_scaffold_18550_5

Organism: Genasci_Feb2018_S35_SO-1_Woesearchaeota_40_64

near complete RP 32 / 55 MC: 6 BSCG 22 / 51 ASCG 31 / 38
Location: comp(3328..4605)

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=523844 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina thermophila TM-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.4
  • Coverage: 419.0
  • Bit_score: 640
  • Evalue 1.40e-180
Diaminopimelate decarboxylase (EC:4.1.1.20) similarity KEGG
DB: KEGG
  • Identity: 70.6
  • Coverage: 419.0
  • Bit_score: 630
  • Evalue 3.00e-178
Diaminopimelate decarboxylase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TSR9_METAC similarity UNIREF
DB: UNIREF100
  • Identity: 69.9
  • Coverage: 419.0
  • Bit_score: 628
  • Evalue 3.10e-177

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Taxonomy

Methanosarcina thermophila → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1278
ATGTTTAAAAGTAAAATGCAACAAAAAAAATTACCATTCACAAAAGCGAAAATACTGGATATTATAAAAAAATACCCAACGCCTTTTCATATTTACGATGAAAAGGCTATTCGGCAGAATGCAAGGAATTTTCTGAAGTCATTTGGGATGCTTGAGGGCTTCAGGCAGTTCTTTGCAGTAAAGGCAAATCCAAATCCTTATCTAATAAAGATTCTAAAGCAAGAGGGAATGGGTGTTGACTGCAGCTCGTTGCCAGAGCTTGAAATAGCTGAAAGGCTTGAATTTAAAGGAAAAGATATAATGTTCAGCTCGAATGATACTCCTGCAGAGGAATTTGTAAAAGCAAGAAAGCTTGGCGCAGTAATAAACTTGGATGACACAAGCCACATAGATTTTCTTGAGAAAGCAGCAGGAATTCCTGACTTGATTTGCTTTAGGTACAATCCAGGGCCTGCAAGAAAAGGCAACGAGATAATCGGAAAGCCTGAAGAGGCAAAATATGGCCTGACAAGGAAACAGATGATTGAGTCCTACAAAATTGCAAAGAATAAAAGAGCCAGAAGATTTGGAATGCACACAATGATAATCTCGAATGAGATTAATGAAGGATATTTCATAGAGACTGCAAGGATGATGTTTGAATTGGCTGTTGAAGTTTACAATAAAACTGGAGTTAAAGTGGAATTCGTTAATTTAGGCGGAGGAATAGGAATTCCTTATAGACCTGAGCAGGAGCCGATGTCATATGAAAGGGTTGCCAGAGGAGTGAAAAAAGCCTATGATGAAATAATTGTTAAAAATAAACTTAATCCTATCAAAATATTTACAGAGTGCGGAAGAGTTATCACAGGCCCTTATGGATATCTGATTACAAGGGTAAGGCACATTAAGCATATTTACAGGGATTATGTTGGAACAGATGCAAGCATGGCCAACCTGATGAGGCCTGGAATGTACGGCGCTTACCATCATGTCACAGTGCTTGGCAAGGAAAATGCACCCAAAAACCATGTTTATGACGTGACTGGCTCATTATGCGAGAACAATGACAAGTTTGCAATACAGAGGAAGCTTCCTGAAATCGAAAGAGGGGATATTCTTACAATACATGACACAGGCGCCCATGGCCATGCAATGGGCTTCAATTACAATGGAAAATTAAGGTCGGCAGAGCTTTTGTTGAGAAGCGATGGCTCTGTAAAGCAGATAAGGAGGGCAGAAACAATGAAAGATTATTTTGCAACATTGGATTTTAGAGGATTGGAGGGGTTTGATTGA
PROTEIN sequence
Length: 426
MFKSKMQQKKLPFTKAKILDIIKKYPTPFHIYDEKAIRQNARNFLKSFGMLEGFRQFFAVKANPNPYLIKILKQEGMGVDCSSLPELEIAERLEFKGKDIMFSSNDTPAEEFVKARKLGAVINLDDTSHIDFLEKAAGIPDLICFRYNPGPARKGNEIIGKPEEAKYGLTRKQMIESYKIAKNKRARRFGMHTMIISNEINEGYFIETARMMFELAVEVYNKTGVKVEFVNLGGGIGIPYRPEQEPMSYERVARGVKKAYDEIIVKNKLNPIKIFTECGRVITGPYGYLITRVRHIKHIYRDYVGTDASMANLMRPGMYGAYHHVTVLGKENAPKNHVYDVTGSLCENNDKFAIQRKLPEIERGDILTIHDTGAHGHAMGFNYNGKLRSAELLLRSDGSVKQIRRAETMKDYFATLDFRGLEGFD*