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S36_SO-2_scaffold_160867_7

Organism: Genasci_Feb2018_S36_SO-2_Thaumarchaeota_45_15

near complete RP 28 / 55 MC: 1 BSCG 19 / 51 ASCG 37 / 38 MC: 1
Location: 4887..5117

Top 3 Functional Annotations

Value Algorithm Source
Putative small nuclear ribonucleoprotein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH49_NITGG similarity UNIREF
DB: UNIREF100
  • Identity: 82.9
  • Coverage: 76.0
  • Bit_score: 131
  • Evalue 2.80e-28
Small nuclear ribonucleoprotein, LSM family similarity KEGG
DB: KEGG
  • Identity: 82.9
  • Coverage: 76.0
  • Bit_score: 131
  • Evalue 7.80e-29
Putative small nuclear ribonucleoprotein {ECO:0000313|EMBL:AFU59195.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.9
  • Coverage: 76.0
  • Bit_score: 131
  • Evalue 3.90e-28

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Taxonomy

Candidatus Nitrososphaera gargensis → Nitrososphaera → Nitrososphaerales → Nitrososphaeria → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 231
ATGTCAGTAGATATGGCTATCAAGGTTCTTGAAGAGAGCCTTGGCAAGATGGTGCTCATAAAGCTCAAGGGAGGGAAAGTGATCAGAGGTAATTTGCACGGCTTTGACCAGCACATGAACCTGACCCTCGAGCAGTCAGAGGAGATTATGGAGGATAACAAGACAAATTCATTAGGAACTATTATTGTTAGAGGGGACAATGTGGTGATAATATCACCGCCTCCAAGGTGA
PROTEIN sequence
Length: 77
MSVDMAIKVLEESLGKMVLIKLKGGKVIRGNLHGFDQHMNLTLEQSEEIMEDNKTNSLGTIIVRGDNVVIISPPPR*