ggKbase home page

S36_SO-2_scaffold_65176_7

Organism: Genasci_Feb2018_S36_SO-2_Aenigmarchaeota_53_36

near complete RP 28 / 55 MC: 6 BSCG 20 / 51 ASCG 33 / 38
Location: 5462..5710

Top 3 Functional Annotations

Value Algorithm Source
rpoH; DNA-directed RNA polymerase subunit H (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 53.7
  • Coverage: 82.0
  • Bit_score: 90
  • Evalue 2.20e-16
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025};; TaxID=1343739 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Palaeococcus.;" source="Palaeococcus pacificus DY20341.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.7
  • Coverage: 82.0
  • Bit_score: 90
  • Evalue 1.10e-15
DNA-directed RNA polymerase subunit H n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HIC4_PYRSN similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 76.0
  • Bit_score: 86
  • Evalue 1.10e-14

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Palaeococcus pacificus → Palaeococcus → Thermococcales → Thermococci → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 249
ATGGCAGAAGACAAGGACGAGCAAATCAACATTTTCGAGAGCGGACTCGTGCCGAAGCACGAAATCCTTACCGAGGACCAGAAGGCGCAATTCCTGAAGCAATATAATATTTCCACCAAGCAGCTGCCGCGCATCAGGGCAGACGACCCGGTCGTCAAGCATCTCAGCGGCAAGCGCGGCGACGTGATGCGCATCACGAGGAACGAGCCGGTCATCGGCGAATATTACTATTATCGCATCGTTGCGTAA
PROTEIN sequence
Length: 83
MAEDKDEQINIFESGLVPKHEILTEDQKAQFLKQYNISTKQLPRIRADDPVVKHLSGKRGDVMRITRNEPVIGEYYYYRIVA*