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S36_SO-2_scaffold_479114

Search features with annotation key words

Displaying items 31-60 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S36_SO-2_scaffold_479114_31

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comp(21699..22751)
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI00036185D0
Marine sediment metagenome DNA, contig: S01H4_L01055 {ECO:0000313|EMBL:GAG70065.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
asd; aspartate-semialdehyde dehydrogenase
S36_SO-2_scaffold_479114_32
CG_Woesearch_03, Woesearchaeota, Archaea

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comp(22867..23619)
DNA (753bp) protein (251aa)
hypothetical protein n=2 Tax=unclassified Crenarchaeota RepID=UPI00036870DA
dihydrodipicolinate reductase
Tax=CG_Woesearch_03
S36_SO-2_scaffold_479114_33
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(23616..24515)
DNA (900bp) protein (300aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1).;"
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI000367327C
dihydrodipicolinate synthase
S36_SO-2_scaffold_479114_34
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

Not on your lists

comp(24574..26040)
DNA (1467bp) protein (489aa)
LysC; aspartate kinase (EC:2.7.2.4)
hypothetical protein n=2 Tax=unclassified Crenarchaeota RepID=UPI0003791EAE
Tax=RBG_16_Planctomycetes_59_8_curated
S36_SO-2_scaffold_479114_35
RBG_13_Euryarchaeota_31_8_curated, Euryarchaeota, Archaea

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26196..26891
DNA (696bp) protein (232aa)
Putative uncharacterized protein id=5800355 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=RBG_13_Euryarchaeota_31_8_curated
S36_SO-2_scaffold_479114_36
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(26876..27397)
DNA (522bp) protein (174aa)
adenine phosphoribosyltransferase (EC:2.4.2.7); K00759 adenine phosphoribosyltransferase [EC:2.4.2.7] id=5097815 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
adenine phosphoribosyltransferase
Tax=RBG_13_Woesearchaeota_36_6_curated
S36_SO-2_scaffold_479114_37
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(27405..28190)
DNA (786bp) protein (262aa)
S-methyl-5'-thioadenosine phosphorylase id=2100959 bin=GWB2_Nitrospirae_rel_47_37 species=unknown genus=unknown taxon_order=unknown taxon_class=Mammalia phylum=Chordata tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
5'-deoxy-5'-methylthioadenosine phosphorylase
Tax=CG_Woesearch_01
S36_SO-2_scaffold_479114_38

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comp(28206..28814)
DNA (609bp) protein (203aa)
ZPR1-like zinc finger protein; K06874 zinc finger protein id=5049199 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Zinc finger protein {ECO:0000313|EMBL:KHO45190.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
ZPR1-like protein zinc finger protein
S36_SO-2_scaffold_479114_39
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

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comp(28892..29494)
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI0003451589
ribulose-5-phosphate 4-epimerase-like epimerase or aldolase
Ribulose-5-phosphate 4-epimerase-like epimerase or aldolase {ECO:0000313|EMBL:AFY78553.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
S36_SO-2_scaffold_479114_40
AR19, Pacearchaeaota, DPANN, Archaea

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comp(29487..30596)
DNA (1110bp) protein (370aa)
Methylthioribose-1-phosphate isomerase n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U607_OCEP5
translation initiation factor, aif-2bi family
Tax=AR19
S36_SO-2_scaffold_479114_41
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists


comp(30604..32742)
DNA (2139bp) protein (713aa)
protein containing C-terminal region/beta chain of methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase id=5799554 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=RBG_13_Woesearchaeota_36_6_curated
S36_SO-2_scaffold_479114_42
unknown

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comp(32799..33215)
DNA (417bp) protein (139aa)

This feature has no annotations

S36_SO-2_scaffold_479114_43
unknown

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comp(33269..34066)
DNA (798bp) protein (266aa)

This feature has no annotations

S36_SO-2_scaffold_479114_44
CG_Woesearch_03, Woesearchaeota, Archaea

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comp(34299..34736)
DNA (438bp) protein (146aa)
hypothetical protein
id=5103248 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=CG_Woesearch_03
S36_SO-2_scaffold_479114_45
R_OD1_Magasanikbacteria_33_17, Magasanikbacteria, Parcubacteria, Bacteria

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34958..35674
DNA (717bp) protein (239aa)
cytochrome c biogenesis protein (EC:4.4.1.17); K06196 cytochrome c-type biogenesis protein id=5048645 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
cytochrome c biogenesis protein
Tax=RIFCSPHIGHO2_02_FULL_OD1_Magasanikbacteria_33_17_curated
S36_SO-2_scaffold_479114_46
AR11, Woesearchaeaota, DPANN, Archaea

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35714..35938
DNA (225bp) protein (75aa)
Tax=AR11
S36_SO-2_scaffold_479114_47

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comp(36194..37372)
DNA (1179bp) protein (393aa)
id=5048011 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45605.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
S36_SO-2_scaffold_479114_48
GWA1_OD1_43_17, Nomurabacteria, Parcubacteria, Bacteria

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37490..40321
DNA (2832bp) protein (944aa)
Putative uncharacterized protein n=1 Tax=Dictyostelium fasciculatum (strain SH3) RepID=F4PTN3_DICFS
Uncharacterized protein {ECO:0000313|EMBL:KKS99239.1}; TaxID=1618731 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA1_43_17.;"
hypothetical protein
S36_SO-2_scaffold_479114_49
unknown

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comp(40329..40628)
DNA (300bp) protein (100aa)

This feature has no annotations

S36_SO-2_scaffold_479114_50
CG_Pacearch_03, Pacearchaeota, Archaea

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40738..41442
DNA (705bp) protein (235aa)
putative bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein (EC:2.7.11.1)
Mn2+dependent serine/threonine protein kinase id=4922345 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Tax=CG_Pacearch_03
S36_SO-2_scaffold_479114_51
unknown

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41449..41817
DNA (369bp) protein (123aa)

This feature has no annotations

S36_SO-2_scaffold_479114_52
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

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41822..41962
DNA (141bp) protein (47aa)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
S36_SO-2_scaffold_479114_53
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

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comp(41969..42286)
DNA (318bp) protein (106aa)
id=5048700 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
S36_SO-2_scaffold_479114_54
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(42568..42816)
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000360FC43
hypothetical protein
Tax=CG_Woesearch_02
S36_SO-2_scaffold_479114_55
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(42876..43646)
DNA (771bp) protein (257aa)
exosome complex RNA-binding protein Rrp42; K12589 exosome complex component RRP42 id=5046925 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Ribosomal RNA-processing protein RRP42
Tax=CG_Woesearch_01
S36_SO-2_scaffold_479114_56

Not on your lists

comp(43663..44358)
DNA (696bp) protein (232aa)
Rph; exosome complex exonuclease Rrp41; K11600 exosome complex component RRP41 id=5046926 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Exosome complex exonuclease Rrp41, exosome complex component RRP41 {ECO:0000313|EMBL:KHO45872.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
exosome complex exonuclease Rrp41
S36_SO-2_scaffold_479114_57

Not on your lists

comp(44385..45161)
DNA (777bp) protein (259aa)
rpr43; exosome RNA binding protein (EC:3.1.13.-); K03679 exosome complex component RRP4 id=5046927 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Exosome complex component Rrp4 {ECO:0000256|HAMAP-Rule:MF_00623}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
putative exosome complex RNA-binding protein 1
S36_SO-2_scaffold_479114_58
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(45167..45889)
DNA (723bp) protein (241aa)
RNA-associated protein; K14574 ribosome maturation protein SDO1 id=5046928 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Ribosome maturation protein SDO1-like protein
Tax=CG_Woesearch_01
S36_SO-2_scaffold_479114_59
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(45894..46652)
DNA (759bp) protein (253aa)
psmA; proteasome subunit alpha (EC:3.4.25.1); K03432 proteasome alpha subunit [EC:3.4.25.1] id=5046929 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Proteasome subunit alpha
Tax=CG_Woesearch_01
S36_SO-2_scaffold_479114_60
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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47079..47507
DNA (429bp) protein (143aa)
Tax=RBG_13_Woesearchaeota_36_6_curated
Displaying items 31-60 of 70 in total

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