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AB_69_bin_108

DPANN_genomes_binning_unknown_31_0
In projects: DPANN_genomes_binning  |  DPANN

Consensus taxonomy:

Metagenomic Context

Parent: DPANN_genomes_binning_UNK

Properties

Avg. coverage: 0.03 Longest contig: 29.78 Kbp Bin length: 832.53 Kbp GC content: 31.16 %
Contigs count: 140 Features count: 1115 rRNAs count: 0 tRNAs count: 25

Genome completeness

partial RP 23 / 55 MC: 10 BSCG 25 / 51 MC: 6 ASCG 25 / 38 MC: 4
Displaying items 1-50 of 140 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
AB_69_bin_108_scaffold_1208
Domain: Archaea (54.35%)
46 29775 bp 31.72 0.01 82.07
AB_69_bin_108_scaffold_2229
Domain: Archaea (50%)
28 22502 bp 32.50 0.01 89.50
AB_69_bin_108_scaffold_8047
Domain: Archaea (53.85%)
26 16066 bp 30.28 0.01 80.97
AB_69_bin_108_scaffold_1904
Domain: Bacteria (52%)
25 24170 bp 29.33 0.01 88.20
AB_69_bin_108_scaffold_3630 23 18555 bp 32.28 0.01 89.94
AB_69_bin_108_scaffold_5137
Domain: Archaea (69.57%)
23 15182 bp 29.99 0.01 89.98
AB_69_bin_108_scaffold_17241
Domain: Archaea (50%)
22 17752 bp 32.23 0.01 86.56
AB_69_bin_108_scaffold_3394
Domain: Archaea (61.11%)
18 18465 bp 31.58 0.01 92.30
AB_69_bin_108_scaffold_38498
Domain: Archaea (52.94%)
17 10000 bp 32.12 0.02 82.14
AB_69_bin_108_scaffold_41981
Domain: Archaea (75%)
16 8002 bp 31.82 0.02 94.36
AB_69_bin_108_scaffold_6769
Domain: Archaea (50%)
16 13225 bp 32.05 0.01 90.60
AB_69_bin_108_scaffold_13383 15 9247 bp 32.55 0.02 82.61
AB_69_bin_108_scaffold_18226 15 7886 bp 31.42 0.02 93.13
AB_69_bin_108_scaffold_59829 15 8570 bp 32.38 0.02 81.07
AB_69_bin_108_scaffold_13165 14 9332 bp 32.13 0.02 92.06
AB_69_bin_108_scaffold_16968 14 8194 bp 31.91 0.02 90.74
AB_69_bin_108_scaffold_31694 14 8349 bp 29.96 0.02 82.87
AB_69_bin_108_scaffold_42986
Class: RIF-OD1-7 (50%)
14 4935 bp 33.60 0.03 96.35
AB_69_bin_108_scaffold_13499
Domain: Archaea (53.85%)
13 9212 bp 32.56 0.02 80.81
AB_69_bin_108_scaffold_13733 13 9132 bp 29.12 0.02 86.76
AB_69_bin_108_scaffold_14612
Domain: Archaea (53.85%)
13 10410 bp 31.56 0.01 87.78
AB_69_bin_108_scaffold_21245
Domain: Archaea (61.54%)
13 7904 bp 31.59 0.02 74.14
AB_69_bin_108_scaffold_23557 13 6866 bp 30.19 0.02 86.82
AB_69_bin_108_scaffold_7191 13 12857 bp 30.59 0.01 90.63
AB_69_bin_108_scaffold_15552
Domain: Archaea (50%)
12 9996 bp 32.38 0.02 88.21
AB_69_bin_108_scaffold_46636
Domain: Archaea (50%)
12 6458 bp 31.37 0.02 85.52
AB_69_bin_108_scaffold_7658 12 12446 bp 30.57 0.01 96.87
AB_69_bin_108_scaffold_10679 12 10406 bp 31.96 0.01 84.73
AB_69_bin_108_scaffold_20523
Domain: Archaea (54.55%)
11 7395 bp 29.89 0.02 92.86
AB_69_bin_108_scaffold_20618 11 7379 bp 30.25 0.02 89.77
AB_69_bin_108_scaffold_53449 11 5419 bp 32.02 0.03 81.38
AB_69_bin_108_scaffold_58875
Domain: Archaea (72.73%)
11 6995 bp 31.25 0.02 89.34
AB_69_bin_108_scaffold_12301
Domain: Bacteria (60%)
10 10188 bp 29.61 0.01 95.49
AB_69_bin_108_scaffold_17566 10 8048 bp 31.29 0.02 87.67
AB_69_bin_108_scaffold_18771 10 7757 bp 31.03 0.02 85.15
AB_69_bin_108_scaffold_28170
Domain: Archaea (70%)
10 7639 bp 31.20 0.02 99.12
AB_69_bin_108_scaffold_44669 10 8801 bp 31.04 0.02 91.15
AB_69_bin_108_scaffold_88360 10 4182 bp 29.10 0.04 81.16
AB_69_bin_108_scaffold_9231
Domain: Archaea (50%)
10 11240 bp 29.51 0.01 93.18
AB_69_bin_108_scaffold_13857
Domain: Archaea (55.56%)
9 9086 bp 31.93 0.02 97.04
AB_69_bin_108_scaffold_20217
Domain: Archaea (66.67%)
9 7456 bp 32.81 0.02 78.26
AB_69_bin_108_scaffold_23067 9 6945 bp 30.55 0.02 90.06
AB_69_bin_108_scaffold_30931 9 5915 bp 29.26 0.03 83.65
AB_69_bin_108_scaffold_35303
Domain: Archaea (66.67%)
9 9690 bp 31.32 0.02 90.56
AB_69_bin_108_scaffold_68554 9 6176 bp 33.47 0.02 83.99
AB_69_bin_108_scaffold_73554
Domain: Archaea (88.89%)
9 3650 bp 31.62 0.04 98.71
AB_69_bin_108_scaffold_112114 9 2880 bp 28.58 0.05 84.62
AB_69_bin_108_scaffold_11493
Domain: Bacteria (55.56%)
9 10925 bp 29.60 0.01 86.17
AB_69_bin_108_scaffold_15583 8 8556 bp 31.26 0.02 98.98
AB_69_bin_108_scaffold_17110 8 8161 bp 29.53 0.02 77.34
Displaying items 1-50 of 140 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.