ggKbase home page

Meg_22_1618_bin_104_scaffold_6578_9

Organism: Meg_22_1618_bin_104

near complete RP 34 / 55 MC: 7 BSCG 22 / 51 ASCG 33 / 38 MC: 3
Location: comp(4709..5695)

Top 3 Functional Annotations

Value Algorithm Source
hmo:HM1_1995 rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor id=3700 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11 similarity UNIREF
DB: UNIREF100
  • Identity: 33.7
  • Coverage: 332.0
  • Bit_score: 152
  • Evalue 3.80e-34
Uncharacterized protein {ECO:0000313|EMBL:EKE14619.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.7
  • Coverage: 332.0
  • Bit_score: 152
  • Evalue 5.40e-34
RNA polymerase sigma-70 subunit RpoD similarity KEGG
DB: KEGG
  • Identity: 36.5
  • Coverage: 263.0
  • Bit_score: 150
  • Evalue 5.40e-34

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 987
ATGCTTGACCTTTATATTAGTAAAATAATATCAATGCATGAGTGTTTAAGTAAGGGTGAAATATATAAAATTACTAAAAAAATTAAAAATTATAAAAATGAGATAAATGAAGTTTTAAGCGATGTGTTGGGGATGCCAGTTAAAAAATTTAATAAAAAATATCGTAGAAAAACAATTGAATGGAAATTAAGTAATATTGGGAGGCTAATTGAGGATAAAAAGATTTATAAAAAATTAGCCAGTATAAAGGCAAAATATTTTAGAGAAAGAAATAAATTAATTTGCAGTAACCTAAGATTAGTGTGGAGCATTGCATTAAAACATTATAATAATAACTTAGAGAAAGCGGACTATTTTGGAGAAGGGATAAAAGGATTAATATGTGCTATCAACCACTATGACCCTGATAGAGGATATTGTTTTAGCACATATGCTACTCAATGGATTAACAGCGCAATCAAAAGGGCTATTGATGAATCGAGTTTAATAAAAATTCCTGTTAATCTTCTGTGGAAATTTAGAGCTTATGAAGATTTGTGTAGAAAAACAGGAAAAAAATTAAGTGCTAGAGAATTTGCTAAAAAGAAAAATATAAGTATTGGGGAAGCTAAGAAAGTTATAACAGCACATGAGAATTTGATGAGAAGTTATGTTTCATTAAATACACTGATTAATGAAGACGAAAATATGGAGTTAATAGATACCCTCTCAGATGATTCTGATTATGAGAAAGCTATTGATAAGAGAATTTCAAGAAATACTTTAAATAGTTTAATTGAGGAATATCTTTCTTTAAGGGAGAAAAAAATCATAAAAATGCGTTTAGGATTGGATGGAGAAAGTCCTTCAACTTTTCAGGAAATTGGGAATAAATTTAATTTTTCAAGACAAAGGGCAAAACAGTTACAAGAAAAAGTATTTAAAGAATTATATAAGATAATAAAAAAACAAGATTTAATTACAAATTTAGAATATTTATTTTCATAA
PROTEIN sequence
Length: 329
MLDLYISKIISMHECLSKGEIYKITKKIKNYKNEINEVLSDVLGMPVKKFNKKYRRKTIEWKLSNIGRLIEDKKIYKKLASIKAKYFRERNKLICSNLRLVWSIALKHYNNNLEKADYFGEGIKGLICAINHYDPDRGYCFSTYATQWINSAIKRAIDESSLIKIPVNLLWKFRAYEDLCRKTGKKLSAREFAKKKNISIGEAKKVITAHENLMRSYVSLNTLINEDENMELIDTLSDDSDYEKAIDKRISRNTLNSLIEEYLSLREKKIIKMRLGLDGESPSTFQEIGNKFNFSRQRAKQLQEKVFKELYKIIKKQDLITNLEYLFS*