ggKbase home page

gwa2_scaffold_1782_31

Organism: GW2011_AR3

partial RP 35 / 55 MC: 9 BSCG 14 / 51 ASCG 18 / 38 MC: 1
Location: comp(27908..28624)

Top 3 Functional Annotations

Value Algorithm Source
Probable exosome complex RNA-binding protein 1 n=2 Tax=Methanobacterium RepID=K6U9F7_9EURY similarity UNIREF
DB: UNIREF90
  • Identity: 45.0
  • Coverage: 0.0
  • Bit_score: 210
  • Evalue 4.00e+00
Exosome complex component Rrp4 {ECO:0000256|HAMAP-Rule:MF_00623}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 238.0
  • Bit_score: 467
  • Evalue 9.40e-129
putative exosome complex RNA-binding protein 1 similarity KEGG
DB: KEGG
  • Identity: 56.8
  • Coverage: 227.0
  • Bit_score: 271
  • Evalue 2.60e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

archaeon GW2011_AR3 → Archaea

Sequences

DNA sequence
Length: 717
ATGAGTGAACTGTTAGTACAGGACAAAACCATAGTAGTGCCGGGAGAAGAGCTGGCCGCAGGGATAGATTACCTGCCGGCAGTGGGCACTTATAGGGACAAGGACAAGATAATCGCCTCACGGCTGGGATTGCTGGCTGTTGAAGGAAGGGCATTGAAGGTCATACCCCTGACAGGCAGGTACATGCCAAAGAAAGGGGACACGATCATCGGAAGGGTGATTGATGTGGCGTTCAGCGGCTGGAGAATTGACACAAACAGCGCTTATCCGGCGATGCTGTCGCTCAAGGACGCAACCTCTGAATACATACAGAGGGGTGCTGACCTGACCAGGTATTATGACATTGGAGACTATACTGTCTCAATAATTGTAAATGTCACATCACAGAAGCTGATTGATGTTTCAATGAAAGGGCAGGGCCTCAGGAAGCTTGTTGGCGGAAGGATAATCAAAGTCAATCCGCATAAAGTGCCGAGAATAATCGGAAAGCAAGGCTCCATGGTCAGCATGATAAAGCAGTATACAGACTGCAGGGTTGTAGTCGGCCAGAACGGTGTTGTGTGGATCCAGGGAACTCCTGAAAAGGAGCTTCTGGCAGTCAACACAATCAGGAAAATTGAGACAGAGTCTCATGTGCCTGGCCTGACCGAGAGGATAAAGGAATATCTCGAGGCATCAGGTGCAAGGCCATCTGCGCCGCAGCAGGATAGCCAATAA
PROTEIN sequence
Length: 239
MSELLVQDKTIVVPGEELAAGIDYLPAVGTYRDKDKIIASRLGLLAVEGRALKVIPLTGRYMPKKGDTIIGRVIDVAFSGWRIDTNSAYPAMLSLKDATSEYIQRGADLTRYYDIGDYTVSIIVNVTSQKLIDVSMKGQGLRKLVGGRIIKVNPHKVPRIIGKQGSMVSMIKQYTDCRVVVGQNGVVWIQGTPEKELLAVNTIRKIETESHVPGLTERIKEYLEASGARPSAPQQDSQ*