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gwa2_scaffold_300_29

Organism: GW2011_AR4

partial RP 37 / 55 MC: 5 BSCG 10 / 51 ASCG 20 / 38
Location: 31199..31639

Top 3 Functional Annotations

Value Algorithm Source
NMD3-related protein (Nonsense mediated mRNA decay) n=3 Tax=Methanobrevibacter smithii RepID=A5UKI9_METS3 similarity UNIREF
DB: UNIREF90
  • Identity: 27.0
  • Coverage: 0.0
  • Bit_score: 65
  • Evalue 1.00e+00
NMD3-related protein (nonsense mediated mRNA decay); K07562 nonsense-mediated mRNA decay protein 3 Tax=AR4 UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 146.0
  • Bit_score: 295
  • Evalue 3.00e-77
NMD3-related protein (nonsense mediated mRNA decay) similarity KEGG
DB: KEGG
  • Identity: 27.5
  • Coverage: 138.0
  • Bit_score: 66
  • Evalue 1.00e-08

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Taxonomy

AR4 → Woesearchaeaota → DPANN → Archaea

Sequences

DNA sequence
Length: 441
ATGCATCCAGACTATTTCGAGGGGACCCTCCAGCTCAGGAATCCAAAAGAGGAAGTGATCGCATTCATAAAGAACCAGGTGGCAGGAAGGGATGATGTGCACATCGCAAAGGAAATCAAGACAAGAGAGGGGATTGATTATTTTCTCTCTTCGCAGCATTTTCTCCAAAACCTTGGAAAAAAGCTCCAAAAGCAGTTTGGAGGAACCCTCAAGGTGAGCGCAAAGCTCCATACGAGGGACAGCCAAAAAAGCAAGGATCTTCACAGGGTGACGGTCTACTATGCACCGCCAAGATTCTCCATCAATGATAAGGTGAATGTCAGAGGGGAGATAATCACCATCAAGAGCTTTGGAAAGAAGATTTCAGGGATAGATAAGGCTGGAAGACGTGTGATGTTTGAGGAAAAAGATGTCAGCCCCGCCCCGCCCGGTACTGGTTAA
PROTEIN sequence
Length: 147
MHPDYFEGTLQLRNPKEEVIAFIKNQVAGRDDVHIAKEIKTREGIDYFLSSQHFLQNLGKKLQKQFGGTLKVSAKLHTRDSQKSKDLHRVTVYYAPPRFSINDKVNVRGEIITIKSFGKKISGIDKAGRRVMFEEKDVSPAPPGTG*