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gwa2_scaffold_2235_8

Organism: GW2011_AR19

partial RP 38 / 55 MC: 7 BSCG 21 / 51 MC: 1 ASCG 23 / 38 MC: 2
Location: comp(5383..6195)

Top 3 Functional Annotations

Value Algorithm Source
exosome complex RNA-binding protein Rrp42 (EC:3.1.13.-); K12589 exosome complex component RRP42 Tax=AR19 UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 270.0
  • Bit_score: 532
  • Evalue 3.50e-148
Ribonuclease PH-related protein n=3 Tax=Methanobrevibacter smithii RepID=A5UJR8_METS3 similarity UNIREF
DB: UNIREF90
  • Identity: 45.0
  • Coverage: 0.0
  • Bit_score: 230
  • Evalue 6.00e+00
Ribosomal RNA-processing protein RRP42 similarity KEGG
DB: KEGG
  • Identity: 50.6
  • Coverage: 253.0
  • Bit_score: 242
  • Evalue 1.90e-61

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Taxonomy

AR19 → Pacearchaeaota → DPANN → Archaea

Sequences

DNA sequence
Length: 813
ATGAAAAATATAAATACAACCCCGGACGTAACAATAAAAAAGATAAATGAGTATTTAAAAATCAATAAAAGATTTGACGGAAGAAAGACCGACGAATTCAGGGATTTAATTATTGAAAAAGATGTTTCAAATAAAGCAGAAGGTTCTGTAAGAGTAAAACTTGGAAAAACAGAAGTTATTGTTGGCATTAAAGCAGATGTTGCTGAACCCTATCCAGACTCTCCAGACAAGGGAAATTTAATGGTTACCGCTGAATTGCTCCCTTTAAGTTCTTCAAGATTTGAACTTGGACCTCCAAAATTTGATACAATTGAACTTGGAAGAATTATTGACAGAGGAATCAGGGAAAGCGGGGTAATCGATTTTAAAAAACTCGTTATTAAGGAAGGAGAAAAAGTCTGGGCAATTTTTATTGATATTTATTCCATTAACGATGACGGAAATTTATTGGATGCTGCAGGAATTGGTGCGTTGGTTGCGCTGAAGCTGGCTAAACTGCCGAAATATAATGAAAAAGAAGAAAAAGTTTTGCATGACCAGCACGATAAAGAAATTCCTTTAACAGATGTAAATCCAATACCTATAACAATTCATAAAATAGGAAATAAATTAATTGTGGACCCTGTAAAAGAAGAAGAGGATGCCAGCGAAACAAGATTAACAATAGGGATTTCAGACGGCATAATTTCATCCATGCAAAAAGGGAATATCTTTCCCTTGAAAGATGAAGAGATATTTGAAGCCATCGATATAGCAGATAAAACTTGGAAAGAATTATTTAAAAAGATTGAAAAATTTTTAAAATCTAAATGA
PROTEIN sequence
Length: 271
MKNINTTPDVTIKKINEYLKINKRFDGRKTDEFRDLIIEKDVSNKAEGSVRVKLGKTEVIVGIKADVAEPYPDSPDKGNLMVTAELLPLSSSRFELGPPKFDTIELGRIIDRGIRESGVIDFKKLVIKEGEKVWAIFIDIYSINDDGNLLDAAGIGALVALKLAKLPKYNEKEEKVLHDQHDKEIPLTDVNPIPITIHKIGNKLIVDPVKEEEDASETRLTIGISDGIISSMQKGNIFPLKDEEIFEAIDIADKTWKELFKKIEKFLKSK*