ggKbase home page

SCGC_AAA011_G17_7_17

Organism: DUSEL4_archaeon_SCGC_AAA011_G17

partial RP 37 / 55 MC: 8 BSCG 15 / 51 MC: 1 ASCG 0 / 38
Location: comp(12679..13335)

Top 3 Functional Annotations

Value Algorithm Source
pre-mRNA processing ribonucleoprotein KEGG
DB: KEGG
  • Identity: 32.0
  • Coverage: 222.0
  • Bit_score: 127
  • Evalue 5.50e-27
Protein implicated in ribosomal biogenesis, Nop56p homolog similarity jgi
DB: jgi
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 0
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Aenigma_01 → Aenigmaarchaeota → Archaea

Sequences

DNA sequence
Length: 657
ATGGACCTGAGAGAAAAAGCAATTGAATTCACAAGAGAGAAATTAAAGCAGTCTTTAACACCAGACTTGATTATTATCCAGTATGCCCATTTATCAGAATCACTAAACAAGACAAATCTAATCTTAATAAAGAAACTAAAAGATATCTTGCAGATAGAATTTCCGGAATTATTAGATAAAATAAAGGATGAAAAGAGATTAATAGAAATAATCTCAGAAAAATCCTTGGAAGAAATAAAGCAGACTTATGTAAAAGAAACAATTGGAAAACAGAATTTAGAAATTCTAAAGCAGTTATCTTTGAAAATACAAGGCATAAAAGAATTAAAAAATCAGACAGACAAATACATAGAAAGTTTATTAGTTAATCATTATCCCTTACTGGCAAAAACAGCAGGCTCATACATTGCCTCAAGATTACTGATGCAGGCATCTTCAGCAGAAAACCTTGCAAAAATGCCCTCATCCAAAATACAAATATTAGGAGCAGAAAAAGCCTTTTTCCAGTCACAGCAGAATCAGACAAGAACACCAAGATTTGGGGTTATTGCACAACATTCATCAATAGCTAAACTTCCAGAATCACAAAAAGCAAGAGAAGCAAGAGCTCTAGCTTCAGCAATATCAAAAGCAATAAAACAGGATTATTTCAGATGA
PROTEIN sequence
Length: 219
MDLREKAIEFTREKLKQSLTPDLIIIQYAHLSESLNKTNLILIKKLKDILQIEFPELLDKIKDEKRLIEIISEKSLEEIKQTYVKETIGKQNLEILKQLSLKIQGIKELKNQTDKYIESLLVNHYPLLAKTAGSYIASRLLMQASSAENLAKMPSSKIQILGAEKAFFQSQQNQTRTPRFGVIAQHSSIAKLPESQKAREARALASAISKAIKQDYFR*