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SCGC_AAA011_G17_20_7

Organism: DUSEL4_archaeon_SCGC_AAA011_G17

partial RP 37 / 55 MC: 8 BSCG 15 / 51 MC: 1 ASCG 0 / 38
Location: 6139..6678

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFOXYA2_FULL_Berkelbacteria_43_10_curated UNIPROT
DB: UniProtKB
  • Identity: 34.3
  • Coverage: 178.0
  • Bit_score: 112
  • Evalue 5.80e-22
RNA polymerase ECF-type sigma factor KEGG
DB: KEGG
  • Identity: 35.2
  • Coverage: 182.0
  • Bit_score: 106
  • Evalue 1.10e-20
RNA polymerase sigma factor, sigma-70 family similarity jgi
DB: jgi
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 0
  • Evalue 0.0

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Taxonomy

RIFOXYA2_FULL_Berkelbacteria_43_10_curated → Berkelbacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGGCAATAGAATATAACAATTTACAAGAGATGGTTGAAAAGGCCCAAGCAGGAAATAGCTATGCATTTGGAGAGATAGTTAGCAATTATAATGGGAAGCTGCTGAATTTTGTTAGAAAATGGCTGCATGACCATGATGAAGCAGAGGATCTTGTTCAGGAAACATACACAAGAATGTTCAGGAATATAAAGAGTTATGACGAAAAAAAGGGCAGTTTTAGCTTGTGGATGTTTACTATAGCAATCAACCTTATAAGAAATGATAAAAGGAATAAAACAAGACAAAAAACAGATACATTCAGCAATAGCATTCTTGAAAAAATCATAACTGCGGAAGATGCTGAATATACAGATTTATCTTATGTGAAAAATAATATCAACAGACTGAAAGATAAATACAAACTGCCTATAATATATTTTTATTATGAGAATAAGAGATATAAGGACATAGCGGAAATCCTTGGGATCTCAATGAGTTCTGTTAAAAGCAGGATTAGAAGGGCTAAAAAAATACTGGAAAGGACTATAATAAATGATTAG
PROTEIN sequence
Length: 180
MAIEYNNLQEMVEKAQAGNSYAFGEIVSNYNGKLLNFVRKWLHDHDEAEDLVQETYTRMFRNIKSYDEKKGSFSLWMFTIAINLIRNDKRNKTRQKTDTFSNSILEKIITAEDAEYTDLSYVKNNINRLKDKYKLPIIYFYYENKRYKDIAEILGISMSSVKSRIRRAKKILERTIIND*