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SCGC_AAA011_L22_21_7

Organism: DUSEL4_archaeon_sp_SCGC_AAA011_L22

partial RP 32 / 55 MC: 2 BSCG 15 / 51 MC: 1 ASCG 0 / 38
Location: 3605..5389

Top 3 Functional Annotations

Value Algorithm Source
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=RIFCSPHIGHO2_12_FULL_TM6_32_22_curated UNIPROT
DB: UniProtKB
  • Identity: 26.7
  • Coverage: 592.0
  • Bit_score: 146
  • Evalue 9.20e-32
rpoD; RNA polymerase sigma factor RpoD KEGG
DB: KEGG
  • Identity: 24.5
  • Coverage: 550.0
  • Bit_score: 122
  • Evalue 4.90e-25
hypothetical protein similarity jgi
DB: jgi
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 0
  • Evalue 0.0

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Taxonomy

RHI_TM6_32_22 → TM6 → Bacteria

Sequences

DNA sequence
Length: 1785
ATGGAAAAAGAAAAGGCATATAAAATACTAAAAAGGACCACTATTGACGCACTTGGTACCTATGGGTTTAGAGAGAAATTCTTACAAGAAATTAACTTATTAATGTGGGGTTATGGTAATAATCATCACTCTCCAAATGGGAAAAATATTCTGTTAAGACTGGAAGATTTGGTGCATACTGTTTATTCTGGCAATTCGGATCAGGAAAAAATTATCCAGAACTTCACAAATGATGTTAATAGTCTAAGATTTATGCTTGGAGATTTCAAAATAAACCATGGAACAGCAGAGTATTATACTTATACACCGTCGGAGGAAAAAAAAGAGACTACGGAAGAAGTAACTACAGAAAAAAAAGTGGAGGAGAAAAAGAGTGAAGAAGATACAGACTTTTCAAATATTTATTTTGATGGATTAAAAAAAAATCCCTATGATGTAGGCTTATTAAAAACCTTGCCAAAAAAAGAAAGAGAAGAATTGAAAAAAAAGATTGAAAAGGAAAAAAATGAAGTTTTTGAAAAGATTGAAATTGCAAAAATTGGTATTTACAGAACTTTAGCTGAAAATCAGATATGTTATCTTTTTTTTAATAAACATTTTGATTATATTACTGAAAGAAATGGAATTAGAAATATATTAAGAAATTATGAAGGGAGAAAGGACGAAGCAAAAGAAATAATAGTTAAAAATGTAAAATTATTTAAAGAAAATATTGATACTTACTTTGAAAAAATTAATTCAGCAAAGAAAAATTTAGAGGAAAAAACAGAATTAAATTCTTTATCTTTGGCATTGGCTGAATATCTTATTAATAATTTTAGTCCTATCCCAATAAATAGACTAACAAAGGAAATATTTGCTGAATATGATTCTTTATTGGAATTAGCAGAAGAAGAACAAAGCTACCATAAACAAGATAAAGAAGTCCCAGCAGATCTTAGAATAAAAATTGATAACTGCATAAAGAAGATTGAGCCGAATAAAACAATAGATGTATTATTAAATGAGGGAATAGAACTAAAAAAATACCAAGAAGAGATAACAAAAGAAAGGAAGAAAATAGTATATCTTTTTCTTGGCATTGCCATTGAGATGGGAAATAGTTTTTATGATAATTCTAACTGGCTTGAACAAAGTAAAAATACATCAAAAGAAGATGTAATACAATGGGCAATTATGGGTCTTATACGTGCATCACACAATGCGAGTTTTTATACTAAATTTATAAAATATGCAAAGTGGGTTATAAAAAATGAAATAATTATTAACTCAAATGGTTCAGCAAGAACAATAACCCCTTCTCGAATAATGGTAGATAAAATGATAAAATATTCCAAATTTGAATATAACACATTAATGAAAAAGGGCTATAGGCCTACAGATGAAGAAATAATAAGGGAAACAAAACTAACACCAGAAGATATAAGAAAGATAAAACTAATAATGAAAGAACCGACATCTTTAGACAGTTTTACTTGTGATGATATAAAATTAGGGGATATTATACCAGACAAAGAATGTATAAATCATTTAGAAGAAATTACAGAATCAGAAAAATATGAACAAATAAGGGAAGCTGTTTCTGAACTGAAAGGAACATATGCAAAAATAATTAGATTGCGTCATGGTTTTTGTCCAGAAAATTCCAATGAAGAGGTAAATCCAATGACTCTTGAGAAAATAGGAAAATTATTTGGAACAGGCAGAGAAAATATCAGGCAGAAGGAAGAAAAAGCCATAAACCAACTAAGAAAGAAGCTGGAAATACTCGGAATAACTGTTTAA
PROTEIN sequence
Length: 595
MEKEKAYKILKRTTIDALGTYGFREKFLQEINLLMWGYGNNHHSPNGKNILLRLEDLVHTVYSGNSDQEKIIQNFTNDVNSLRFMLGDFKINHGTAEYYTYTPSEEKKETTEEVTTEKKVEEKKSEEDTDFSNIYFDGLKKNPYDVGLLKTLPKKEREELKKKIEKEKNEVFEKIEIAKIGIYRTLAENQICYLFFNKHFDYITERNGIRNILRNYEGRKDEAKEIIVKNVKLFKENIDTYFEKINSAKKNLEEKTELNSLSLALAEYLINNFSPIPINRLTKEIFAEYDSLLELAEEEQSYHKQDKEVPADLRIKIDNCIKKIEPNKTIDVLLNEGIELKKYQEEITKERKKIVYLFLGIAIEMGNSFYDNSNWLEQSKNTSKEDVIQWAIMGLIRASHNASFYTKFIKYAKWVIKNEIIINSNGSARTITPSRIMVDKMIKYSKFEYNTLMKKGYRPTDEEIIRETKLTPEDIRKIKLIMKEPTSLDSFTCDDIKLGDIIPDKECINHLEEITESEKYEQIREAVSELKGTYAKIIRLRHGFCPENSNEEVNPMTLEKIGKLFGTGRENIRQKEEKAINQLRKKLEILGITV*