ggKbase home page

AB_1215_Bin_116.fna_scaffold_39738_5

Organism: AB_1215_Bin_116

near complete RP 32 / 55 MC: 4 BSCG 18 / 51 MC: 1 ASCG 37 / 38 MC: 2
Location: comp(3176..5122)

Top 3 Functional Annotations

Value Algorithm Source
DEAD_2 domain protein n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I7C4_METB6 similarity UNIREF
DB: UNIREF100
  • Identity: 21.4
  • Coverage: 543.0
  • Bit_score: 73
  • Evalue 4.50e-10
ERCC2/XPD/Rad3-related DNA repair helicase similarity KEGG
DB: KEGG
  • Identity: 22.8
  • Coverage: 500.0
  • Bit_score: 104
  • Evalue 6.70e-20
DEAD_2 domain protein {ECO:0000313|EMBL:ABS55635.1}; TaxID=456442 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula boonei (strain 6A8).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 21.4
  • Coverage: 543.0
  • Bit_score: 73
  • Evalue 6.30e-10

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methanoregula boonei → Methanoregula → Methanomicrobiales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1947
CCTGAGAAGTTCATGTCGTTCTTTCCCTATTCCGAGTTCAAGCCCCAGCAGCTGCCTGTAATGGAGTTTGTTTCGAATGTTGTTGAAAAAGGGGGAATTGGGTTGGTTGAGGCCTACTGCGGCTTTGGGAAGACAATTTCGACGCTTGCGCCTGTGTTCGAGCAGGGGAAGAAGGTTTTGTTGCTTTCGCCGACCCACACGGCTAGGAACGCCGGAATTGCAGAGGCCCTGAGGATAAACAAGGTGAAAGGCAAGAGGCTGATGGTGGCGGACTTGCGCTCAAAGGCCACAATGTGCGCCATGTTTCCAAAAAGCAGGTTCAGCTACGAGGCCTGCTGGAGGGTCAGGAAGTTCAAGGAATGCGAATTTTTCAGGTCAACCTATTATGGGAAGGAGCTCTCCCAAAAGGCCAGGAAGGCAATCTCCGAGGCGGAATCCCTTGTTTTCAAAACCCCGGAAAAGATTTTTGCCGGCGGAAATATGGGCAAGGAGCCCAACTTCTTCAAGGCCTTTGAGGGAATTTGCGAAGAAAACGGGGTGTGCTTTTATGAAACAATGAGACAGGTCATCAAAAAGGCCGACGTCGTGGTCCTGGACTACTACTGGTGCTTTACCGAAATTTTTGCCCTGCTCAAAATGCTGATTGACCCAAAGGACTTTGTGCTGTTAATTGACGAGGCAGACCTCCTGGTTGACAGGCTCTACAACCAGCTCCACACCAAGCTGACATACCAAGGGGTAAAAGACTTGGTTAACCAGTCCAAGAGAATCCTGAAGGACGAAAAGGGTTTGGACGAGGAGAGAAAGACCCTGAACAAGGCAGACTTCGAGTTCCTAAGAGAGTTTTCAGTCCACACAATTGAAATTCTGCAAAACATTCCCCCAAAAAAGCCGCTTTTGCCGGAGAAACTAATGTGGCACTACATCAGCGGGTTCAAGAGAAGCTCGCAGGAGGCAGGCCTTGAGGGCACAATGGAGTTCGGCGGCATTGTGGAAAACGTTGAAAGAATAACGGACGCAATTGACTCAAGCAACGTTTCAGAGAAAGCGAGGTTCAGCCCACACCTGTTCCTAAAAAAGCTCAGCCAGGTAAGGGGCTCGGAAAAGCACCTAACCTTCATCACCGAATCACAAGAAGAAATCTTCATCAAGCCATTTGAAATAAAGTCGGAAAGGCTTGCAAGCGGGCTCACGGCGGTTGAAACAATAACCGAGTTCCACAGCACAATACTGTTCTCGGCAACAATCGGGGACGAAAACCTGTTCATGGAGGAATTCGGCCTGGACAAACAACAGACAAAGGTCTTCAAGCTCAGCCACATGCCCCACGAAAACCTCCTGCTAATAATTGACACCGAGCTGGACTCAACATTCAGCAAAAGGATGGCCAACGCCCCAAAGTACGCGGCAAAGGTTGAGCTCTTGCTGGAACAGGACCTCTCGCTTCTGGTAAGCTGCTGCAACCAGTTTGAAACAGACCAAATGATTGAGGCAATCCCGGAAATGGAGAGCGGGCAGGACAACGAAAACCTTGACGGAGAAAGGCCCTACGCAATAAACATAAGGACAAAACACGCAAGGAGCACAAACAAGGCAAGCAAGGTAAGAAACTGCATTGTTGTCGGTCTTCCCCTGCCGGACTACTCAGACTTCTACTTCAAGCAAAGAAAGAGCTACTTGGAAAAAAAATACGGAAAAGAGCACGCCGGAAAACTGATCAACAGGAAGGCAGTTGACATAGCCGTCCAGCTAATGGGCCGGATCACAAGAGACCTCTCAAGCCCGAAAACAATGGTCCTGGCCGACAAAAGGTACAAAAGGGACTTCTTTCTGGGAGACTTCTACTATGAGACAATCCCCCAGTACCTCAAGCCATACATCAAGGTTGTTGGAAGCAACAGCGAGCTCAGAAAAGAAATAAGCGAGTTTTGGAAAAAGGCGAGGTAA
PROTEIN sequence
Length: 649
PEKFMSFFPYSEFKPQQLPVMEFVSNVVEKGGIGLVEAYCGFGKTISTLAPVFEQGKKVLLLSPTHTARNAGIAEALRINKVKGKRLMVADLRSKATMCAMFPKSRFSYEACWRVRKFKECEFFRSTYYGKELSQKARKAISEAESLVFKTPEKIFAGGNMGKEPNFFKAFEGICEENGVCFYETMRQVIKKADVVVLDYYWCFTEIFALLKMLIDPKDFVLLIDEADLLVDRLYNQLHTKLTYQGVKDLVNQSKRILKDEKGLDEERKTLNKADFEFLREFSVHTIEILQNIPPKKPLLPEKLMWHYISGFKRSSQEAGLEGTMEFGGIVENVERITDAIDSSNVSEKARFSPHLFLKKLSQVRGSEKHLTFITESQEEIFIKPFEIKSERLASGLTAVETITEFHSTILFSATIGDENLFMEEFGLDKQQTKVFKLSHMPHENLLLIIDTELDSTFSKRMANAPKYAAKVELLLEQDLSLLVSCCNQFETDQMIEAIPEMESGQDNENLDGERPYAINIRTKHARSTNKASKVRNCIVVGLPLPDYSDFYFKQRKSYLEKKYGKEHAGKLINRKAVDIAVQLMGRITRDLSSPKTMVLADKRYKRDFFLGDFYYETIPQYLKPYIKVVGSNSELRKEISEFWKKAR*