ggKbase home page

AB_1215_Bin_123.fna_scaffold_5399_5

Organism: AB_1215_Bin_123

near complete RP 29 / 55 MC: 8 BSCG 20 / 51 MC: 2 ASCG 31 / 38 MC: 2
Location: comp(3450..4298)

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.7
  • Coverage: 277.0
  • Bit_score: 340
  • Evalue 2.00e-90
Diaminopimelate epimerase n=1 Tax=Clostridium sp. CAG:411 RepID=R7HYL0_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 56.7
  • Coverage: 277.0
  • Bit_score: 340
  • Evalue 1.50e-90
diaminopimelate epimerase similarity KEGG
DB: KEGG
  • Identity: 55.9
  • Coverage: 281.0
  • Bit_score: 336
  • Evalue 6.00e-90

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. CAG:411 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 849
ATGCAGATAAGATTCACAAAGATGCACGGTCTTGGAAACGACTACATCTTCATAAACTGCTTTGTGGAGGACCTTGGAAAAACCAGCCTGAAAGAACTCGCAATCAATATGAGCAAGCCCCACTACGGTATCGGCTCAGACGGGATGATCCTGATCATGCCACCAGTATCAGAAGAAAACGACTTCAAATACCGCATATTCAACTCAGACGGATCCGAGGCAGAGATGTGCGGAAACGGCATAAGATGCGCAGCAAGATACGTATACGAGCACAACCTCACAAAAAAGACGAAACTGAGATTCGAAACAAAAGCAGGCATAATAATACCTGAATTGATTCTGAAAAACAACAAAGTATCGCAAATCCGTGTAGACATGGGCGAACCGGTCCTTGAGCGCAAAAAAATACCGATGATTGGACCAGCTGGCTCAGTCATAGGCGAAAACCTAAACATAGACAATAAAACCCTGAAAATAACCTGCGTCTCAATGGGCAACCCCCACTGCATAATATTCACAAGAGACACACAATTCAAAGACTTCGAGCCATTGGGAAAAGCAATAGAAACCCACGACTCATTCCCCAAAAGAACAAACGTAGAATTCATACAGGTATTAAACGAAAAAGAGATCGTGATGCGCGTCTGGGAGCGCGCCGAAGGCGAAACCCTTGCATGCGGAACCGGCGCATGCGCATCAGCAGTAGCATGTGTCCTGAACAAAAAGACAGATAGAACCGTAACAGTTCACCTGAAAGGCGGGGACCTGAAAATCGAATGGGATAAGGACTCAAACCACGTCTTCATGACCGGTCCGGCAGTTGAGGTTTTTGAAGGGATTTGGTCCTAA
PROTEIN sequence
Length: 283
MQIRFTKMHGLGNDYIFINCFVEDLGKTSLKELAINMSKPHYGIGSDGMILIMPPVSEENDFKYRIFNSDGSEAEMCGNGIRCAARYVYEHNLTKKTKLRFETKAGIIIPELILKNNKVSQIRVDMGEPVLERKKIPMIGPAGSVIGENLNIDNKTLKITCVSMGNPHCIIFTRDTQFKDFEPLGKAIETHDSFPKRTNVEFIQVLNEKEIVMRVWERAEGETLACGTGACASAVACVLNKKTDRTVTVHLKGGDLKIEWDKDSNHVFMTGPAVEVFEGIWS*