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AB_1215_Bin_137.fna_scaffold_35

Search features with annotation key words

Displaying items 31-60 of 202 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_1215_Bin_137.fna_scaffold_35_31

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20655..20903
DNA (249bp) protein (83aa)
Marine sediment metagenome DNA, contig: S01H1_S06361 {ECO:0000313|EMBL:GAG13804.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
id=5050163 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
AB_1215_Bin_137.fna_scaffold_35_32
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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20881..21210
DNA (330bp) protein (110aa)
Putative uncharacterized protein id=3133066 bin=GWA2_Ignavibacteria-rel_35_8 species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_16_Micrarchaeota_49_10_curated
AB_1215_Bin_137.fna_scaffold_35_33
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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21315..22055
DNA (741bp) protein (247aa)
rnp3; ribonuclease P protein component 3 (EC:3.1.26.5)
Ribonuclease P protein component 3 id=4214076 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Tax=CG_Aenigma_01
AB_1215_Bin_137.fna_scaffold_35_34
Thermococcus eurythermalis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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22052..22411
DNA (360bp) protein (120aa)
ribonuclease P protein component 2 (EC:3.1.26.5)
Ribonuclease P protein component 2 {ECO:0000256|HAMAP-Rule:MF_00755}; Short=RNase P component 2 {ECO:0000256|HAMAP-Rule:MF_00755};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00755};; Pop5 {ECO:0000256|HAMAP-Rule:MF_00755}; TaxID=1505907 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus eurythermalis.;"
Ribonuclease P protein component 2 id=4214080 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
AB_1215_Bin_137.fna_scaffold_35_35
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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22563..23267
DNA (705bp) protein (235aa)
psmA; proteasome subunit alpha (EC:3.4.25.1); K03432 proteasome alpha subunit [EC:3.4.25.1] id=18313351 bin=Nanosalina tax=Nanosalina
Proteasome subunit alpha {ECO:0000256|RuleBase:RU000552}; EC=3.4.25.1 {ECO:0000256|RuleBase:RU000552};; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
proteasome subunit alpha (EC:3.4.25.1)
AB_1215_Bin_137.fna_scaffold_35_36
Methanopyrus kandleri, Methanopyrus, Methanopyrales, Methanopyri, Euryarchaeota, Archaea

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23367..24062
DNA (696bp) protein (232aa)
Predicted exosome subunit n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TYB8_METKA
RNA-associated protein
Predicted exosome subunit {ECO:0000313|EMBL:AAM01599.1}; TaxID=190192 species="Archaea; Euryarchaeota; Methanopyri; Methanopyrales; Methanopyraceae; Methanopyrus.;" source="Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC; 100938).;"
AB_1215_Bin_137.fna_scaffold_35_37
CG_Woesearch_03, Woesearchaeota, Archaea

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24137..24748
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Alcanivorax hongdengensis A-11-3 RepID=L0WAY4_9GAMM
hypothetical protein
Tax=CG_Woesearch_03
AB_1215_Bin_137.fna_scaffold_35_38
R_RIF_OD1_13_49_12, RIF-OD1-13, Parcubacteria, Bacteria

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24850..25287
DNA (438bp) protein (146aa)
Uncharacterized protein id=5094755 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_13_49_12_curated
AB_1215_Bin_137.fna_scaffold_35_39
Methanocaldococcus vulcanius, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(25290..25943)
DNA (654bp) protein (218aa)
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00351}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00351};; TaxID=579137 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7); (Methanococcus vulcanius).;"
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase n=1 Tax=Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) RepID=C9RGQ4_METVM
fibrillarin
AB_1215_Bin_137.fna_scaffold_35_40

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26003..26653
DNA (651bp) protein (217aa)
hypothetical protein
hypothetical protein id=5241854 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF60845.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_137.fna_scaffold_35_41
AR15, Woesearchaeaota, DPANN, Archaea

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comp(26663..28396)
DNA (1734bp) protein (578aa)
glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] id=5800018 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR15
AB_1215_Bin_137.fna_scaffold_35_42

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28632..29576
DNA (945bp) protein (315aa)
Uncharacterized protein id=5800014 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61345.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
hypothetical protein
AB_1215_Bin_137.fna_scaffold_35_43
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(29598..30686)
DNA (1089bp) protein (363aa)
hypothetical protein; K07027 id=24613864 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ESP89650.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum tyrrellensis G22.;"
UPF0104 family protein
AB_1215_Bin_137.fna_scaffold_35_44
unknown

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comp(30710..30862)
DNA (153bp) protein (51aa)

This feature has no annotations

AB_1215_Bin_137.fna_scaffold_35_45
unknown

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comp(30944..31714)
DNA (771bp) protein (257aa)

This feature has no annotations

AB_1215_Bin_137.fna_scaffold_35_46
S_OP1_64_32, KB1, Bacteria

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31960..32574
DNA (615bp) protein (205aa)
thymidine kinase (EC:2.7.1.21); K00857 thymidine kinase [EC:2.7.1.21] id=5044270 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
thymidine kinase (EC:2.7.1.21)
Tax=S_OP1_64_32
AB_1215_Bin_137.fna_scaffold_35_47
unknown

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32709..33398
DNA (690bp) protein (230aa)

This feature has no annotations

AB_1215_Bin_137.fna_scaffold_35_trna_4
unknown

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comp(33508..33581)
DNA (74bp)
transferRNA Arg
AB_1215_Bin_137.fna_scaffold_35_48

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34067..37072
DNA (3006bp) protein (1002aa)
Parallel beta-helix repeat protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KNG1_ARCVS
Marine sediment metagenome DNA, contig: S01H1_L02165 {ECO:0000313|EMBL:GAF71265.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
parallel beta-helix repeat-containing protein
AB_1215_Bin_137.fna_scaffold_35_49
unknown

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37315..37803
DNA (489bp) protein (163aa)

This feature has no annotations

AB_1215_Bin_137.fna_scaffold_35_50
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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37902..39302
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y8W7_SORCE
hypothetical protein
Tryptophan synthase alpha chain {ECO:0000313|EMBL:AKF03106.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
AB_1215_Bin_137.fna_scaffold_35_51
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

39457..40233
DNA (777bp) protein (259aa)
Integral membrane protein DUF95 n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QGG0_9EURY
hypothetical protein
Tax=RBG_13_Pacearchaeota_36_9_curated
AB_1215_Bin_137.fna_scaffold_35_52
unknown

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comp(40249..40527)
DNA (279bp) protein (93aa)

This feature has no annotations

AB_1215_Bin_137.fna_scaffold_35_53
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(40527..47834)
DNA (7308bp) protein (2436aa)
Endonuclease I n=1 Tax=Marinomonas mediterranea (strain ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1) RepID=F2JWZ6_MARM1
endonuclease I
Tax=CG_Delta_07
AB_1215_Bin_137.fna_scaffold_35_54
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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comp(48024..49808)
DNA (1785bp) protein (595aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036398B8
Tax=RBG_16_Micrarchaeota_49_10_curated
AB_1215_Bin_137.fna_scaffold_35_55
unknown

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49909..50517
DNA (609bp) protein (203aa)

This feature has no annotations

AB_1215_Bin_137.fna_scaffold_35_56
unknown

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50641..51108
DNA (468bp) protein (156aa)

This feature has no annotations

AB_1215_Bin_137.fna_scaffold_35_57
Pseudothermotoga thermarum, Pseudothermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

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comp(51113..51631)
DNA (519bp) protein (173aa)
NUDIX hydrolase n=1 Tax=Thermotoga thermarum DSM 5069 RepID=F7YWM5_9THEM
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:AEH52010.1}; TaxID=688269 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Pseudothermotoga.;" source="Pseudothermotoga thermarum DSM 5069.;"
AB_1215_Bin_137.fna_scaffold_35_58
unknown

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51762..52001
DNA (240bp) protein (80aa)

This feature has no annotations

AB_1215_Bin_137.fna_scaffold_35_59
unknown

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comp(51998..52672)
DNA (675bp) protein (225aa)

This feature has no annotations

Displaying items 31-60 of 202 in total

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