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AB_3033_bin_170_scaffold_38

Search features with annotation key words

Displaying items 61-90 of 168 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_3033_bin_170_scaffold_38_56
GWE2_CPR3_35_7, CPR3, Bacteria

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comp(45966..46370)
DNA (405bp) protein (135aa)
Putative uncharacterized protein id=1828200 bin=GWE2_CPR3_35_7 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=GWE2_CPR3_35_7 organism_group=CPR3 organism_desc=Good
Uncharacterized protein {ECO:0000313|EMBL:KKP86947.1}; TaxID=1618349 species="Bacteria; candidate division CPR3.;" source="candidate division CPR3 bacterium GW2011_GWE2_35_7.;"
NUDIX domain-containing protein
AB_3033_bin_170_scaffold_38_trna_7
unknown

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comp(46449..46520)
DNA (72bp)
transferRNA Thr
AB_3033_bin_170_scaffold_38_57
CG_CPR10_03, CG_CPR10, Bacteria

Not on your lists

46543..48168
DNA (1626bp) protein (542aa)
Tax=CG_CPR10_03
AB_3033_bin_170_scaffold_38_58

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comp(48165..49652)
DNA (1488bp) protein (496aa)
glycyl-tRNA synthetase (EC:6.1.1.14)
glycyl-tRNA synthetase (EC:6.1.1.14); K01880 glycyl-tRNA synthetase [EC:6.1.1.14] id=5240553 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Glycyl-tRNA synthetase {ECO:0000313|EMBL:AJF59546.1}; EC=6.1.1.14 {ECO:0000313|EMBL:AJF59546.1};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_170_scaffold_38_59
Parcubacteria bacterium GW2011_GWA2_48_9, Parcubacteria, Bacteria

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49746..50552
DNA (807bp) protein (269aa)
Protein implicated in ribosomal biogenesis, Nop56p-like protein {ECO:0000313|EMBL:KKW00624.1}; TaxID=1618850 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_48_9.;"
nucleolar protein 56
rRNA biogenesis protein Nop56/Nop58; K14564 nucleolar protein 56 id=5240552 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
AB_3033_bin_170_scaffold_38_60

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50576..51250
DNA (675bp) protein (225aa)
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00351}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00351};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
fibrillarin-like protein pre-rRNA processing protein
fibrillarin; K04795 fibrillarin-like pre-rRNA processing protein id=5240551 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
AB_3033_bin_170_scaffold_38_61

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51260..51826
DNA (567bp) protein (189aa)
hypothetical protein
hypothetical protein id=5240548 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF59541.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_170_scaffold_38_62
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(52226..52693)
DNA (468bp) protein (156aa)
Transposase n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WJM9_9EURY
Transposase {ECO:0000313|EMBL:ENO11736.1}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
AB_3033_bin_170_scaffold_38_trna_3
unknown

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53158..53230
DNA (73bp)
transferRNA Arg
AB_3033_bin_170_scaffold_38_63
unknown

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53288..53758
DNA (471bp) protein (157aa)

This feature has no annotations

AB_3033_bin_170_scaffold_38_64

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53890..54603
DNA (714bp) protein (238aa)
Marine sediment metagenome DNA, contig: S01H1_S10367 {ECO:0000313|EMBL:GAG01024.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
hypothetical protein; K07731 putative transcriptional regulator id=5240544 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
AB_3033_bin_170_scaffold_38_65
AR10, Diapherotrites, DPANN, Archaea

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comp(54609..55313)
DNA (705bp) protein (235aa)
hypothetical protein
hypothetical protein; K07562 nonsense-mediated mRNA decay protein 3 id=5240542 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_170_scaffold_38_66
unknown

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comp(55318..56148)
DNA (831bp) protein (277aa)

This feature has no annotations

AB_3033_bin_170_scaffold_38_67
AR10, Diapherotrites, DPANN, Archaea

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comp(56155..57429)
DNA (1275bp) protein (425aa)
hypothetical protein
beta-lactamase domain-containing protein; K07577 putative mRNA 3-end processing factor id=5240540 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_170_scaffold_38_68
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(57455..57649)
DNA (195bp) protein (65aa)
4 Fe-4S ferredoxin n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LUU5_THEPS
4 Fe-4S ferredoxin
Tax=RBG_13_Bathyarchaeota_46_16b_curated
AB_3033_bin_170_scaffold_38_69
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

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comp(57656..57874)
DNA (219bp) protein (73aa)
Iron-sulfur cluster assembly accessory protein n=2 Tax=Waddlia chondrophila RepID=D6YW49_WADCW id=5103548 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Iron-sulfur cluster assembly accessory protein
Tax=GWF1_Spirochaetes_41_5_curated
AB_3033_bin_170_scaffold_38_70

Not on your lists

comp(57901..58602)
DNA (702bp) protein (234aa)
Pyruvate formate lyase activating enzyme {ECO:0000313|EMBL:KHO55674.1}; EC=1.97.-.- {ECO:0000313|EMBL:KHO55674.1};; EC=1.97.1.4 {ECO:0000313|EMBL:KHO55674.1};; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
anaerobic ribonucleoside-triphosphate reductase activating protein (EC:1.97.1.4)
Ribonucleoside-triphosphate reductase, anaerobic-like protein n=1 Tax=sediment metagenome RepID=D9PK73_9ZZZZ
AB_3033_bin_170_scaffold_38_71
GWE2_Bacteroidetes_29_8_curated, Bacteroidetes, Bacteria

Not on your lists

comp(58624..58770)
DNA (147bp) protein (49aa)
nrdD; anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase id=1791241 bin=GWE2_Bacteroidetes_29_8 species=Chlorobium phaeobacteroides genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWE2_Bacteroidetes_29_8 organism_group=Bacteroidetes organism_desc=Good
Tax=GWE2_Bacteroidetes_29_8_curated
AB_3033_bin_170_scaffold_38_72
RIFOXYB1_FULL_RIF_OD1_06_38_37_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(58757..62080)
DNA (3324bp) protein (1108aa)
chd:Calhy_2106 anaerobic ribonucleoside-triphosphate reductase; K00527 ribonucleoside-triphosphate reductase [EC:1.17.4.2] id=95921 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Tax=RIFOXYB1_FULL_RIF_OD1_06_38_37_curated
AB_3033_bin_170_scaffold_38_73
RBG_13_OD1_Falkowbacteria_39_14_curated, Falkowbacteria, Parcubacteria, Bacteria

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comp(62547..63683)
DNA (1137bp) protein (379aa)
DSBA oxidoreductase
DSBA oxidoreductase id=5241602 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=RBG_13_OD1_Falkowbacteria_39_14_curated
AB_3033_bin_170_scaffold_38_74

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comp(63752..64216)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3INE5_9PLAN id=5103885 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF63163.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
AB_3033_bin_170_scaffold_38_75
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64391..64729
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003775BB7
AbrB family transcriptional regulator
Tax=RBG_16_Deltaproteobacteria_54_18_curated
AB_3033_bin_170_scaffold_38_76
MPF_Thermotogae_50_1627, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

64742..65452
DNA (711bp) protein (237aa)
phosphonate-transporting ATPase (EC:3.6.3.28)
Phosphonate-transporting ATPase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SE24_RHOMR
Tax=MPF_Thermotogae_50_1627
AB_3033_bin_170_scaffold_38_77
Methanosarcina vacuolata, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

65449..66681
DNA (1233bp) protein (411aa)
S-layer domain-like protein n=1 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A274_NATTJ
NPCBM-associated, NEW3 domain of alpha-galactosidase
NPCBM-associated, NEW3 domain of alpha-galactosidase {ECO:0000313|EMBL:AKB45509.1}; TaxID=1434123 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina vacuolata Z-761.;"
AB_3033_bin_170_scaffold_38_78
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

66740..67942
DNA (1203bp) protein (401aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035E3555
hypothetical protein
Tax=AR6
AB_3033_bin_170_scaffold_38_79
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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67971..69191
DNA (1221bp) protein (407aa)
Putative uncharacterized protein n=1 Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S848_METSF
hypothetical protein
Tax=RBG_13_Pacearchaeota_33_26_curated
AB_3033_bin_170_scaffold_38_80
unknown

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69393..69647
DNA (255bp) protein (85aa)

This feature has no annotations

AB_3033_bin_170_scaffold_38_81
unknown

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comp(69686..70843)
DNA (1158bp) protein (386aa)

This feature has no annotations

AB_3033_bin_170_scaffold_38_82
AR10, Diapherotrites, DPANN, Archaea

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comp(70909..71658)
DNA (750bp) protein (250aa)
putative circadian clock protein KaiC (EC:2.7.11.1) id=5240528 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
hypothetical protein
Tax=AR10
AB_3033_bin_170_scaffold_38_83
unknown

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71755..72480
DNA (726bp) protein (242aa)

This feature has no annotations

Displaying items 61-90 of 168 in total

View Taxonomy