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AB_3033_bin_170_scaffold_332

Search features with annotation key words

Displaying items 61-90 of 173 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_3033_bin_170_scaffold_332_61
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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38235..39335
DNA (1101bp) protein (367aa)
DNA methyltransferase C1 id=5044351 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
modification methyltransferase
Tax=RBG_16_Micrarchaeota_36_9_curated
AB_3033_bin_170_scaffold_332_62
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

39881..40039
DNA (159bp) protein (53aa)
Fused DNA topoisomerase I/SWI domain-containing protein id=4863511 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=Nitrosopumilales taxon_class=unknown phylum=Thaumarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA topoisomerase I-fused to SWI domain
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
AB_3033_bin_170_scaffold_332_trna_1
unknown

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40230..40301
DNA (72bp)
transferRNA Asp
AB_3033_bin_170_scaffold_332_63
unknown

Not on your lists

comp(40493..40897)
DNA (405bp) protein (135aa)

This feature has no annotations

AB_3033_bin_170_scaffold_332_64
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

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41018..42178
DNA (1161bp) protein (387aa)
Transporter, CPA2 family (2.A.37) n=1 Tax=Sulfurimonas autotrophica (strain ATCC BAA-671 / DSM 16294 / JCM 11897 / OK10) RepID=E0UUI1_SULAO
CPA2 family transporter
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
AB_3033_bin_170_scaffold_332_65
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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42702..43676
DNA (975bp) protein (325aa)
Putative uncharacterized protein id=3308552 bin=GWA1_Deltaproteobacteria_52_35 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
hypothetical protein
Tax=GWA1_Bdellovibrionales_52_35_curated
AB_3033_bin_170_scaffold_332_66
unknown

Not on your lists

43661..43861
DNA (201bp) protein (67aa)

This feature has no annotations

AB_3033_bin_170_scaffold_332_67
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

44166..44390
DNA (225bp) protein (75aa)
Glutaredoxin n=1 Tax=Anaerobaculum hydrogeniformans ATCC BAA-1850 RepID=D3L0D9_9BACT
hypothetical protein
Tax=CG_Woesearch_02
AB_3033_bin_170_scaffold_332_68
CG_Woesearch_02, Woesearchaeota, Archaea

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44394..45596
DNA (1203bp) protein (401aa)
Putative uncharacterized protein n=1 Tax=Desulfobulbus propionicus DSM 2032 RepID=E8RCD8_DESPD id=1241084 bin=RBG2 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG2 organism_group=Chloroflexi
hypothetical protein
Tax=CG_Woesearch_02
AB_3033_bin_170_scaffold_332_69
CG_Micra_06, Micraarchaeota, Archaea

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comp(45613..46572)
DNA (960bp) protein (320aa)
CaCA family Na(+)/Ca(+) antiporter n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KLX1_9ARCH
Na+/Ca+ antiporter, CaCA family
Tax=CG_Micra_06
AB_3033_bin_170_scaffold_332_70
Macaca fascicularis, Macaca, Primates, Mammalia, Chordata, Metazoa

Not on your lists

46684..47265
DNA (582bp) protein (194aa)
Putative uncharacterized protein n=1 Tax=Macaca fascicularis RepID=G7P384_MACFA
Putative uncharacterized protein {ECO:0000313|EMBL:EHH53411.1}; TaxID=9541 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca.;" source="Macaca fascicularis (Crab-eating macaque) (Cynomolgus monkey).;"
metal dependent phosphohydrolase
AB_3033_bin_170_scaffold_332_71

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47582..47824
DNA (243bp) protein (81aa)
DNA-directed RNA polymerase subunit H n=1 Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S663_METSF
Marine sediment metagenome DNA, contig: S01H1_L08755 {ECO:0000313|EMBL:GAF95141.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
RNA polymerase Rpb5
AB_3033_bin_170_scaffold_332_72
AR10, Diapherotrites, DPANN, Archaea

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47825..49291
DNA (1467bp) protein (489aa)
DNA-directed RNA polymerase subunit B (EC:2.7.7.6)
DNA-directed RNA polymerase subunit B (EC:2.7.7.6); K13798 DNA-directed RNA polymerase subunit B [EC:2.7.7.6] id=5241333 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_170_scaffold_332_73
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

49288..51120
DNA (1833bp) protein (611aa)
DNA-directed RNA polymerase subunit B' (EC:2.7.7.6)
DNA-directed RNA polymerase, subunit b' (EC:2.7.7.6); K03044 DNA-directed RNA polymerase subunit B' [EC:2.7.7.6] id=5241335 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_170_scaffold_332_74

Not on your lists

51205..53817
DNA (2613bp) protein (871aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
DNA-directed RNA polymerase subunit A'; K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] id=5241336 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
DNA-directed RNA polymerase subunit A' (EC:2.7.7.6)
AB_3033_bin_170_scaffold_332_75
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

53829..55079
DNA (1251bp) protein (417aa)
rpoA2; DNA-directed RNA polymerase subunit A' (EC:2.7.7.6)
rpoA2; DNA-directed RNA polymerase, subunit A'' (EC:2.7.7.6); K03042 DNA-directed RNA polymerase subunit A" [EC:2.7.7.6] id=5241337 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_170_scaffold_332_76

Not on your lists


55082..55384
DNA (303bp) protein (101aa)
50S ribosomal protein L30, large subunit ribosomal protein L30e {ECO:0000313|EMBL:KHO55780.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
large subunit ribosomal protein L30e
LSU ribosomal protein l30e; K02908 large subunit ribosomal protein L30e id=5241338 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
AB_3033_bin_170_scaffold_332_77

Not on your lists

55405..55818
DNA (414bp) protein (138aa)
nusA; N utilization substance protein A
nusA; transcription elongation factor NusA-like protein; K02600 N utilization substance protein A id=5241339 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
N utilization substance protein A {ECO:0000313|EMBL:AJF60330.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_170_scaffold_332_78
AR10, Diapherotrites, DPANN, Archaea

Not on your lists


55834..56262
DNA (429bp) protein (143aa)
30S ribosomal protein S12, small subunit ribosomal protein S12
rps12P; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 id=5241340 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_170_scaffold_332_79

Not on your lists


56281..56883
DNA (603bp) protein (201aa)
small subunit ribosomal protein S7
30S ribosomal protein S5e (S7p); K02992 small subunit ribosomal protein S7 id=5241341 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Small subunit ribosomal protein S7 {ECO:0000313|EMBL:KHO55783.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
AB_3033_bin_170_scaffold_332_80
AR10, Diapherotrites, DPANN, Archaea

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56904..59096
DNA (2193bp) protein (731aa)
fusA; elongation factor 2
fusA; elongation factor EF-2; K03234 elongation factor 2 id=5241342 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_170_scaffold_332_81
R_OD1_Yanofskybacteria_38_22b, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(59130..60242)
DNA (1113bp) protein (371aa)
N-acylneuraminate-9-phosphate synthase (EC:2.5.1.57)
SAF domain protein id=3807800 bin=GWA2_Elusi_like_61_42 species=Desulfovibrio sp. A2 genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_38_22b_curated
AB_3033_bin_170_scaffold_332_82
unknown

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60335..60784
DNA (450bp) protein (150aa)

This feature has no annotations

AB_3033_bin_170_scaffold_332_83

Not on your lists

60959..62236
DNA (1278bp) protein (426aa)
elongation factor 1-alpha (EC:2.7.7.4)
elongation factor 1-alpha (EC:2.7.7.4); K03231 elongation factor 1-alpha id=5241343 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Elongation factor 1-alpha {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004060}; Short=EF-1-alpha {ECO:0000256|HAMAP-Rule:MF_00118};; Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_170_scaffold_332_84

Not on your lists


62328..62636
DNA (309bp) protein (103aa)
small subunit ribosomal protein S10
SSU ribosomal protein s10p; K02946 small subunit ribosomal protein S10 id=5241344 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508, ECO:0000256|SAAS:SAAS00243320}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_170_scaffold_332_85
Nitratiruptor sp. SB155-2, Nitratiruptor, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

62696..63217
DNA (522bp) protein (174aa)
rpiB; ribose 5-phosphate isomerase B (EC:5.3.1.6)
Ribose 5-phosphate isomerase B {ECO:0000313|EMBL:BAF69822.1}; EC=5.3.1.6 {ECO:0000313|EMBL:BAF69822.1};; TaxID=387092 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Nitratiruptor.;" source="Nitratiruptor sp. (strain SB155-2).;"
Ribose 5-phosphate isomerase B n=1 Tax=Nitratiruptor sp. (strain SB155-2) RepID=A6Q2W3_NITSB
AB_3033_bin_170_scaffold_332_86
R_OP11_Levybacteria_36_15, Levybacteria, Microgenomates, Bacteria

Not on your lists

63247..63681
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Crenarchaeota archaeon SCGC AAA471-B05 RepID=UPI00036CEA3E
ADP-ribose pyrophosphatase
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_36_15_curated
AB_3033_bin_170_scaffold_332_87
Methanocaldococcus sp. JH146, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

63674..64093
DNA (420bp) protein (140aa)
Protein archease n=1 Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S474_METSF
hypothetical protein
Protein archease {ECO:0000256|HAMAP-Rule:MF_01222}; TaxID=1301915 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus sp. JH146.;"
AB_3033_bin_170_scaffold_332_88
Methanothermobacter sp. CaT2, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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64097..65530
DNA (1434bp) protein (478aa)
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=866790 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter.;" source="Methanothermobacter sp. CaT2.;"
tRNA-splicing ligase RtcB n=1 Tax=Methanothermococcus thermolithotrophicus RepID=UPI000376C314
hypothetical protein
AB_3033_bin_170_scaffold_332_89
unknown

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65574..65735
DNA (162bp) protein (54aa)

This feature has no annotations

Displaying items 61-90 of 173 in total

View Taxonomy