ggKbase home page

AB_3033_bin_170_scaffold_38_95

Organism: AB_3033_bin_170

near complete RP 31 / 55 MC: 4 BSCG 19 / 51 ASCG 37 / 38 MC: 2
Location: comp(78710..79489)

Top 3 Functional Annotations

Value Algorithm Source
Exosome complex component RRP42 {ECO:0000313|EMBL:KHO55689.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.5
  • Coverage: 260.0
  • Bit_score: 312
  • Evalue 4.20e-82
exosome complex component RRP42 similarity KEGG
DB: KEGG
  • Identity: 55.2
  • Coverage: 259.0
  • Bit_score: 297
  • Evalue 2.20e-78
exosome complex RNA-binding protein Rrp42; K12589 exosome complex component RRP42 id=5241845 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 similarity UNIREF
DB: UNIREF100
  • Identity: 55.2
  • Coverage: 259.0
  • Bit_score: 297
  • Evalue 7.60e-78

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

archaeon GW2011_AR21 → Archaea

Sequences

DNA sequence
Length: 780
ATGGAAAAAATGATATGGGATATTGAAGCCAATAAGGTAACTTCCTTGATTAAGGAAGGTAAAAGGGTTGACGGCAGGAAATTGGATGAACGAAGAAAAGTAACAGTTCTAAAAAATATAAGTGACAATGCCGACGGAAGTGCCAAAGTAACCCTTGGCAAAACAGAGGTTATGGCCGGTGTAAAGATGGTTCTGGGAACACCCTACCCTGATAATCCTGACAAGGGAACAATCAGTGTTGGAGTAGAGCTTTTGCCTTTGGCAAGCCCTCAATTTGAGGTTGGTCCTCCAAGAGAGAATGCAATAGAAATTGCAAGAGTTGTTGACAGGGGCATAAGAGAAGGCAAGGCAATAGACTTCAAAAGTCTTTGTGTAAGAGAAGGAGAACTTGTTTGGATTGCATTCATAGATTTTTATGTAACAAACTATGACGGCAATGCATTTGACGCAGGAAGCATTGCGGCTCTTGCTGCATTGAACGAGACAAAGATTCCGAAGATCGAAGACGATAAAGTTGTAAAGCATGAGTACAGTGGAAAACTCAAACTTGCAAAACAACCGCTTCTTACAACAGTTTCAAAGATTGCAGGAAATCTTGTTTTGGATCCTGTTCTTATTGAAGAAAAAGCTCAGGATGCAAGGTTCAGCTGTGCTGTTTCAGACGATAAAACAATGTGTGCTTTCCAGAAAGGTTTTGGAGGCTCTTTTAAGGTAAGTGAAATAGATGAATGTATTGACTTATCTTTTAAAAGTGCAAAAGAATTGAGGAAATTAGTGTAA
PROTEIN sequence
Length: 260
MEKMIWDIEANKVTSLIKEGKRVDGRKLDERRKVTVLKNISDNADGSAKVTLGKTEVMAGVKMVLGTPYPDNPDKGTISVGVELLPLASPQFEVGPPRENAIEIARVVDRGIREGKAIDFKSLCVREGELVWIAFIDFYVTNYDGNAFDAGSIAALAALNETKIPKIEDDKVVKHEYSGKLKLAKQPLLTTVSKIAGNLVLDPVLIEEKAQDARFSCAVSDDKTMCAFQKGFGGSFKVSEIDECIDLSFKSAKELRKLV*