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AB_3033_bin_53_scaffold_340

Search features with annotation key words

Displaying items 31-60 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_3033_bin_53_scaffold_340_trna_1
unknown

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24542..24612
DNA (71bp)
transferRNA Cys
AB_3033_bin_53_scaffold_340_31
unknown

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24637..25008
DNA (372bp) protein (124aa)

This feature has no annotations

AB_3033_bin_53_scaffold_340_32
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

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25017..26417
DNA (1401bp) protein (467aa)
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=SYC_DICT6
Tax=CG_Wolfe_01
AB_3033_bin_53_scaffold_340_33
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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26458..26709
DNA (252bp) protein (84aa)
Tax=RBG_16_Micrarchaeota_36_9_curated
AB_3033_bin_53_scaffold_340_34
unknown

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comp(26706..26822)
DNA (117bp) protein (39aa)

This feature has no annotations

AB_3033_bin_53_scaffold_340_35
unknown

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27464..27748
DNA (285bp) protein (95aa)

This feature has no annotations

AB_3033_bin_53_scaffold_340_36
Bacillus megaterium, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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27860..28609
DNA (750bp) protein (250aa)
putative uridine phosphorylase (EC:2.4.1.1)
Putative uridine phosphorylase {ECO:0000313|EMBL:ADE68658.1}; EC=2.4.1.1 {ECO:0000313|EMBL:ADE68658.1};; TaxID=545693 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus megaterium (strain ATCC 12872 / QMB1551).;"
Putative uridine phosphorylase n=1 Tax=Bacillus megaterium (strain ATCC 12872 / QMB1551) RepID=D5E2N1_BACMQ
AB_3033_bin_53_scaffold_340_37
unknown

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28777..29178
DNA (402bp) protein (134aa)

This feature has no annotations

AB_3033_bin_53_scaffold_340_38
unknown

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29316..29645
DNA (330bp) protein (110aa)

This feature has no annotations

AB_3033_bin_53_scaffold_340_39

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comp(29801..30358)
DNA (558bp) protein (186aa)
30S ribosomal protein S3Ae id=3060186 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
30S ribosomal protein S3Ae {ECO:0000256|HAMAP-Rule:MF_00359, ECO:0000256|SAAS:SAAS00194211}; Ribosomal protein S1e {ECO:0000256|HAMAP-Rule:MF_00359}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
RPS1A; 30S ribosomal protein S3
AB_3033_bin_53_scaffold_340_40
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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comp(30342..31718)
DNA (1377bp) protein (459aa)
Single-stranded-DNA-specific exonuclease RecJ (EC:3.1.-.-)
Single-stranded DNA-specific exonuclease n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QHQ1_9EURY
Single-stranded DNA-specific exonuclease {ECO:0000313|EMBL:EGQ42781.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
AB_3033_bin_53_scaffold_340_41
Methanocaldococcus villosus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(31734..32171)
DNA (438bp) protein (146aa)
30S ribosomal protein S15 n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VR59_9EURY
30S ribosomal protein S15
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343}; TaxID=1069083 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus villosus KIN24-T80.;"
AB_3033_bin_53_scaffold_340_42
unknown

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32232..32843
DNA (612bp) protein (204aa)

This feature has no annotations

AB_3033_bin_53_scaffold_340_43
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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33255..33716
DNA (462bp) protein (154aa)
hypothetical protein id=18313441 bin=Nanosalina tax=Nanosalina
Archaeal holliday junction resolvase {ECO:0000313|EMBL:EGQ43229.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
hypothetical protein
AB_3033_bin_53_scaffold_340_44
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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33722..34312
DNA (591bp) protein (197aa)
Peptidase M50 n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2RSS6_METFO
Peptidase M50 {ECO:0000313|EMBL:EKF85800.1}; TaxID=1204725 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium formicicum DSM 3637.;"
peptidase M50
AB_3033_bin_53_scaffold_340_45
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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34361..35653
DNA (1293bp) protein (431aa)
Putative uncharacterized protein n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AD02_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EHK01331.1}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
hypothetical protein
AB_3033_bin_53_scaffold_340_46
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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35691..37883
DNA (2193bp) protein (731aa)
Hef nuclease n=2 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AD04_9EURY
Hef nuclease {ECO:0000313|EMBL:EHK01333.1}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
helicase domain-containing protein
AB_3033_bin_53_scaffold_340_47
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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38355..38933
DNA (579bp) protein (193aa)
# 4886 # 5566 # 1 # ;gc_cont=0.405 id=18312663 bin=Haloredivivus tax=Haloredivivus
Uncharacterized protein {ECO:0000313|EMBL:EHK01334.1}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
hypothetical protein
AB_3033_bin_53_scaffold_340_48
Candidatus Nanosalinarum sp. J07AB56, Candidatus Nanosalinarum, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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39052..39624
DNA (573bp) protein (191aa)
TATA-box-binding protein n=1 Tax=Candidatus Nanosalinarum sp. J07AB56 RepID=G0QBY9_9EURY
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408, ECO:0000256|RuleBase:RU000523}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA-box factor {ECO:0000256|HAMAP-Rule:MF_00408}; TaxID=889962 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalinarum.;" source="Nanosalinarum sp. (strain J07AB56).;"
TATA-box-binding protein
AB_3033_bin_53_scaffold_340_49
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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39626..41650
DNA (2025bp) protein (675aa)
mcm; DNA replication initiator protein; K10726 replicative DNA helicase Mcm [EC:3.6.4.-] id=18313277 bin=Haloredivivus tax=Haloredivivus
DNA replication initiator (Cdc21/Cdc54) {ECO:0000313|EMBL:EHK00700.1}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
DNA replication initiator Cdc21/Cdc54
AB_3033_bin_53_scaffold_340_50
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

41660..42475
DNA (816bp) protein (272aa)
# 149748 # 150497 # 1 # ;gc_cont=0.457 id=18314699 bin=Nanosalina tax=Nanosalina
Uncharacterized protein conserved in archaea {ECO:0000313|EMBL:EGQ42868.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
AB_3033_bin_53_scaffold_340_51
Methanococcus voltae, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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42478..42867
DNA (390bp) protein (130aa)
Translation initiation factor 2 subunit beta n=1 Tax=Methanococcus voltae (strain ATCC BAA-1334 / A3) RepID=D7DV62_METV3
translation initiation factor aIF-2 subunit beta
Translation initiation factor 2 subunit beta {ECO:0000256|HAMAP-Rule:MF_00232}; aIF2-beta {ECO:0000256|HAMAP-Rule:MF_00232}; eIF-2-beta {ECO:0000256|HAMAP-Rule:MF_00232}; TaxID=456320 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus.;" source="Methanococcus voltae (strain ATCC BAA-1334 / A3).;"
AB_3033_bin_53_scaffold_340_52
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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42955..43290
DNA (336bp) protein (112aa)
Translation initiation factor IF-1A n=2 Tax=Candidatus Haloredivivus sp. G17 RepID=H0ABK3_9EURY
Translation initiation factor IF-1A {ECO:0000313|EMBL:EHK01842.1}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
translation initiation factor 1a (aeif-1a)
AB_3033_bin_53_scaffold_340_53
Methanococcus voltae, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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43355..43861
DNA (507bp) protein (169aa)
KH domain protein n=1 Tax=Methanococcus voltae (strain ATCC BAA-1334 / A3) RepID=D7DS98_METV3
KH domain-containing protein
KH domain protein {ECO:0000313|EMBL:ADI36008.1}; TaxID=456320 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus.;" source="Methanococcus voltae (strain ATCC BAA-1334 / A3).;"
AB_3033_bin_53_scaffold_340_54
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

43867..45495
DNA (1629bp) protein (543aa)
Type 2 DNA topoisomerase 6 subunit B {ECO:0000256|HAMAP-Rule:MF_00322}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00322};; Type II DNA topoisomerase VI subunit B {ECO:0000256|HAMAP-Rule:MF_00322}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
Type 2 DNA topoisomerase 6 subunit B n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QG59_9EURY
DNA topoisomerase VI, subunit B
AB_3033_bin_53_scaffold_340_55
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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45479..46600
DNA (1122bp) protein (374aa)
Type 2 DNA topoisomerase 6 subunit A {ECO:0000256|HAMAP-Rule:MF_00132}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00132};; Type II DNA topoisomerase VI subunit A {ECO:0000256|HAMAP-Rule:MF_00132}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
Type 2 DNA topoisomerase 6 subunit A n=3 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AEM4_9EURY
DNA topoisomerase VI subunit A
AB_3033_bin_53_scaffold_340_trna_2
unknown

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46645..46718
DNA (74bp)
transferRNA Phe
AB_3033_bin_53_scaffold_340_56
Caldithrix abyssi, Caldithrix, Bacteria

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46826..47572
DNA (747bp) protein (249aa)
RNA methyltransferase, TrmH family, group 3 n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XXX3_9BACT
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:EHO40848.1}; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
rRNA methylase
AB_3033_bin_53_scaffold_340_57
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(47718..50357)
DNA (2640bp) protein (880aa)
Uncharacterized protein id=18248824 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein
Tax=AR5
AB_3033_bin_53_scaffold_340_trna_3
unknown

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50936..51021
DNA (86bp)
transferRNA Asn
Displaying items 31-60 of 81 in total

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