ggKbase home page

AB_69_bin_160_scaffold_35

Search features with annotation key words

Displaying items 31-60 of 115 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_69_bin_160_scaffold_35_trna_1
unknown

Not on your lists

25727..25850
DNA (124bp)
transferRNA Tyr
AB_69_bin_160_scaffold_35_31
Nanoarchaeum equitans, Nanoarchaeum, Nanoarchaeota, Archaea

Not on your lists

26499..26735
DNA (237bp) protein (79aa)
rpoH; DNA-directed RNA polymerase subunit H (EC:2.7.7.6)
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025};; TaxID=228908 species="Archaea; Nanoarchaeota; Nanoarchaeum.;" source="Nanoarchaeum equitans (strain Kin4-M).;"
DNA-directed RNA polymerase subunit H n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=Q74M66_NANEQ
AB_69_bin_160_scaffold_35_32
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

26728..28215
DNA (1488bp) protein (496aa)
DNA-directed RNA polymerase subunit B (EC:2.7.7.6); K13798 DNA-directed RNA polymerase subunit B [EC:2.7.7.6] id=5043972 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA-directed RNA polymerase
Tax=RBG_13_Woesearchaeota_36_6_curated
AB_69_bin_160_scaffold_35_33
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

28217..30019
DNA (1803bp) protein (601aa)
rpoB2; DNA-directed RNA polymerase, subunit B' (EC:2.7.7.6); K03044 DNA-directed RNA polymerase subunit B' [EC:2.7.7.6] id=5043971 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA-directed RNA polymerase
Tax=CG_Woesearch_01
AB_69_bin_160_scaffold_35_34
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

30021..32615
DNA (2595bp) protein (865aa)
DNA-directed RNA polymerase subunit A' (EC:2.7.7.48); K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] id=5043970 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA-directed RNA polymerase
Tax=AR11
AB_69_bin_160_scaffold_35_35
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

32612..33718
DNA (1107bp) protein (369aa)
DNA-directed RNA polymerase subunit A'' (EC:2.7.7.6); K03042 DNA-directed RNA polymerase subunit A" [EC:2.7.7.6] id=5043969 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA-directed RNA polymerase subunit A''
Tax=CG_Woesearch_02
AB_69_bin_160_scaffold_35_36

Not on your lists


33720..33983
DNA (264bp) protein (88aa)
Marine sediment metagenome DNA, contig: S01H1_S20770 {ECO:0000313|EMBL:GAG19745.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
50S ribosomal protein L30
hypothetical protein; K02908 large subunit ribosomal protein L30e id=5043968 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
AB_69_bin_160_scaffold_35_37
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

33980..34402
DNA (423bp) protein (141aa)
transcription elongation factor NusA-like protein; K02600 N utilization substance protein A id=5043967 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=CG_Woesearch_02
AB_69_bin_160_scaffold_35_38

Not on your lists


34404..34841
DNA (438bp) protein (146aa)
rps12P; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 id=5043966 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU004490}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
30S ribosomal protein S12
AB_69_bin_160_scaffold_35_39
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34976..35932)
DNA (957bp) protein (319aa)
lipid kinase n=1 Tax=Vibrio splendidus RepID=UPI00031ABA8E
Tax=GWF2_Bacteroidetes_49_14_curated
AB_69_bin_160_scaffold_35_40
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(35964..39014)
DNA (3051bp) protein (1017aa)
Isoleucine--tRNA ligase id=5800603 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
isoleucyl-tRNA synthetase
Tax=AR15
AB_69_bin_160_scaffold_35_41
unknown

Not on your lists

39316..39663
DNA (348bp) protein (116aa)

This feature has no annotations

AB_69_bin_160_scaffold_35_42
unknown

Not on your lists

39931..41958
DNA (2028bp) protein (676aa)

This feature has no annotations

AB_69_bin_160_scaffold_35_43
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

42048..42479
DNA (432bp) protein (144aa)
hypothetical protein id=5042289 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=RBG_13_Woesearchaeota_36_6_curated
AB_69_bin_160_scaffold_35_44
unknown

Not on your lists

42515..44698
DNA (2184bp) protein (728aa)

This feature has no annotations

AB_69_bin_160_scaffold_35_45
unknown

Not on your lists

44940..45506
DNA (567bp) protein (189aa)

This feature has no annotations

AB_69_bin_160_scaffold_35_46
Desulfococcus oleovorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45503..45697
DNA (195bp) protein (65aa)
YD repeat protein n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZVU3_DESOH
YD repeat-containing protein
YD repeat protein {ECO:0000313|EMBL:ABW66652.1}; TaxID=96561 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus oleovorans (strain DSM 6200 / Hxd3).;"
AB_69_bin_160_scaffold_35_47
unknown

Not on your lists

45676..45801
DNA (126bp) protein (42aa)

This feature has no annotations

AB_69_bin_160_scaffold_35_48
Alcanivorax sp. P2S70, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46103..47704
DNA (1602bp) protein (534aa)
Uncharacterized protein n=2 Tax=Anolis carolinensis RepID=H9GLB7_ANOCA
Uncharacterized protein {ECO:0000313|EMBL:ERP92379.1}; TaxID=1397527 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax sp. P2S70.;"
cartilage oligomeric matrix protein
AB_69_bin_160_scaffold_35_49
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

47766..49154
DNA (1389bp) protein (463aa)
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] id=5044943 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
cysteinyl-tRNA synthetase
Tax=CG_Woesearch_02
AB_69_bin_160_scaffold_35_50
Marsupenaeus japonicus, Marsupenaeus, Decapoda, Eumalacostraca, Arthropoda, Metazoa

Not on your lists

49210..50586
DNA (1377bp) protein (459aa)
Thrombospondin n=1 Tax=Penaeus japonicus RepID=Q75WG0_PENJP
Thrombospondin {ECO:0000313|EMBL:BAC92764.1}; TaxID=27405 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Dendrobranchiata; Penaeoidea; Penaeidae; Marsupenaeus.;" source="Penaeus japonicus (Kuruma prawn) (Marsupenaeus japonicus).;"
hypothetical protein
AB_69_bin_160_scaffold_35_51
unknown

Not on your lists

50583..51722
DNA (1140bp) protein (380aa)

This feature has no annotations

AB_69_bin_160_scaffold_35_52
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51786..53195
DNA (1410bp) protein (470aa)
Cartilage oligomeric matrix protein n=1 Tax=Gallaecimonas xiamenensis 3-C-1 RepID=K2JLQ6_9GAMM
hypothetical protein
Tax=CG_Delta_07
AB_69_bin_160_scaffold_35_53
GWA1_OP11_ACD12_44_24, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

53249..55741
DNA (2493bp) protein (831aa)
Cathepsin C n=1 Tax=uncultured archaeon GZfos34G5 RepID=Q649T1_9ARCH
Papain family cysteine protease {ECO:0000313|EMBL:KKT59698.1}; TaxID=1618437 species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011_GWA1_44_24b.;"
Dipeptidyl-peptidase I
AB_69_bin_160_scaffold_35_54
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(55899..58337)
DNA (2439bp) protein (813aa)
Valine--tRNA ligase n=1 Tax=uncultured archaeon RepID=D1J9A9_9ARCH
Valine-tRNA ligase
Tax=CG_Woesearch_02
AB_69_bin_160_scaffold_35_55
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

58578..60335
DNA (1758bp) protein (586aa)
RNase L inhibitor; K06174 ATP-binding cassette, sub-family E, member 1 id=5047426 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
ATPase RIL
Tax=RBG_13_Woesearchaeota_36_6_curated
AB_69_bin_160_scaffold_35_56
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(60326..62095)
DNA (1770bp) protein (590aa)
hypothetical protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI00037CE7DD
hypothetical protein
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
AB_69_bin_160_scaffold_35_57
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(62344..64212)
DNA (1869bp) protein (623aa)
Putative uncharacterized protein n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R4V9_SPISS
hypothetical protein
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
AB_69_bin_160_scaffold_35_58
unknown

Not on your lists

comp(64275..64688)
DNA (414bp) protein (138aa)

This feature has no annotations

AB_69_bin_160_scaffold_35_59
unknown

Not on your lists

comp(64685..65722)
DNA (1038bp) protein (346aa)

This feature has no annotations

Displaying items 31-60 of 115 in total

View Taxonomy