ggKbase home page

Meg19_1012_Bin_505_scaffold_416_13

Organism: Meg19_1012_Bin_505

near complete RP 32 / 55 MC: 3 BSCG 23 / 51 MC: 1 ASCG 37 / 38 MC: 2
Location: comp(7985..8767)

Top 3 Functional Annotations

Value Algorithm Source
Exosome complex component RRP42 {ECO:0000313|EMBL:KHO55689.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.7
  • Coverage: 253.0
  • Bit_score: 308
  • Evalue 6.10e-81
exosome complex component RRP42 similarity KEGG
DB: KEGG
  • Identity: 54.4
  • Coverage: 259.0
  • Bit_score: 294
  • Evalue 2.40e-77
exosome complex RNA-binding protein Rrp42; K12589 exosome complex component RRP42 id=5241845 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 similarity UNIREF
DB: UNIREF100
  • Identity: 54.4
  • Coverage: 259.0
  • Bit_score: 294
  • Evalue 8.50e-77

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

archaeon GW2011_AR21 → Archaea

Sequences

DNA sequence
Length: 783
ATGCAAAAAGATATGTTACTTGATTTTAAAGCAGAAAAAGTAGTTACTGCATTAAAAGAAGGAAAAAGACTGGATGCAAGAAAAGTAGATGAATACAGGGAACTAAAAATAGAAAAAGACATTTACCAGAATGCTGAAGGTTCAGCTAAAGTAACTCTTGGAAACACCGAAGTGATTGCAGGAGTTAAATTTCTTTTAGGAACACCCTATCCAGACATGCCAAATGAAGGGACAATTTCAACTGGAATGGAATTAATTCCTTTAGCTTCACCTTATTTTGAATCTGGACCGCCTTCAACTGCTTCAATTGAAATCTCAAGAGTAATAGACAGAGGAATAAGAGAATCAAAAGCAGTGGACTTTGAAAAGCTCTGTGTTAAACAAGGAGAATTTGTTTTCATTGGATTTATTGACATGTATGCAATAAACCATGATGGAAATCTTTTTGATGCAGGATCAATTGCAGCTCTTGCAGCATTAACTGAAGCAAAAGTGCCAAAAGTAGAAGACGAAAAAATTGTAAAAGGAGAATACAGTGGAAAATTAAAGCTGAAAAGAAAGCCTTTGCTGAGCACTTTTTCAAAAATAGGTAATACAATGATTTTAGACTCTACACTTTTAGAGGAAACTGCAGCTCAGGCAAGATTTTCTGTTGCAACAACAGAAGACAATTTTGTTTCTGCTTTCCAGAAAGGCTTAAGCGGTTCAATAAAAAAAGACGATGTAGACAATGCAATAGATGTTGCATTCAAAACAGCAAAAGAAATAAGAAAAAAGTTGTAA
PROTEIN sequence
Length: 261
MQKDMLLDFKAEKVVTALKEGKRLDARKVDEYRELKIEKDIYQNAEGSAKVTLGNTEVIAGVKFLLGTPYPDMPNEGTISTGMELIPLASPYFESGPPSTASIEISRVIDRGIRESKAVDFEKLCVKQGEFVFIGFIDMYAINHDGNLFDAGSIAALAALTEAKVPKVEDEKIVKGEYSGKLKLKRKPLLSTFSKIGNTMILDSTLLEETAAQARFSVATTEDNFVSAFQKGLSGSIKKDDVDNAIDVAFKTAKEIRKKL*