ggKbase home page

Meg22_1012_Bin_201_scaffold_1558

Search features with annotation key words

Displaying items 31-57 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_1012_Bin_201_scaffold_1558_30
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

26710..26985
DNA (276bp) protein (92aa)
10 kDa chaperonin n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E9S7_METMS
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1434121 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina thermophila CHTI-55.;"
chaperonin Cpn10
Meg22_1012_Bin_201_scaffold_1558_31
unknown

Not on your lists

26986..27279
DNA (294bp) protein (98aa)

This feature has no annotations

Meg22_1012_Bin_201_scaffold_1558_32
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

27281..27640
DNA (360bp) protein (120aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
Meg22_1012_Bin_201_scaffold_1558_33
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

27642..29258
DNA (1617bp) protein (539aa)
60 kDa chaperonin n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=CH60_METMA
Heat shock protein 60 family chaperone GroEL
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1434106 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 227.;"
Meg22_1012_Bin_201_scaffold_1558_34
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(29294..29968)
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037B6D64
hypothetical protein
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg22_1012_Bin_201_scaffold_1558_35
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(29965..30525)
DNA (561bp) protein (187aa)
id=5045767 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg22_1012_Bin_201_scaffold_1558_36

Not on your lists

30632..31003
DNA (372bp) protein (124aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50562.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
hypothetical protein
Meg22_1012_Bin_201_scaffold_1558_37
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists


31049..31660
DNA (612bp) protein (204aa)
DNA-directed RNA polymerase subunit E n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VV26_9EURY id=5103653 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase subunit E
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg22_1012_Bin_201_scaffold_1558_38
unknown

Not on your lists

31662..31835
DNA (174bp) protein (58aa)

This feature has no annotations

Meg22_1012_Bin_201_scaffold_1558_39
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

31822..32013
DNA (192bp) protein (64aa)
DNA-directed RNA polymerase subunit E'' (EC:2.7.7.6)
Transcription elongation factor Spt4 n=1 Tax=Thermosphaera aggregans (strain DSM 11486 / M11TL) RepID=D5U3D4_THEAM
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg22_1012_Bin_201_scaffold_1558_40

Not on your lists

32010..32387
DNA (378bp) protein (126aa)
30S ribosomal protein S24e n=1 Tax=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) RepID=RS24_SULIK
Uncharacterized protein {ECO:0000313|EMBL:KHO47012.1}; TaxID=1579364 species="Archaea.;" source="archaeon GW2011_AR1.;"
rps24e; 30S ribosomal protein S24e
Meg22_1012_Bin_201_scaffold_1558_41
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

32393..32614
DNA (222bp) protein (74aa)
30S ribosomal protein S27ae; K02977 small subunit ribosomal protein S27Ae id=5049718 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
30S ribosomal protein S27ae
Tax=RBG_16_Pacearchaeota_35_8_curated
Meg22_1012_Bin_201_scaffold_1558_42
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

32874..33692
DNA (819bp) protein (273aa)
Chromosome segregation and condensation protein ScpA n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GVZ3_9EURY id=5103660 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Chromosome segregation and condensation protein ScpA
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg22_1012_Bin_201_scaffold_1558_43
Sebaldella termitidis, Sebaldella, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

33833..34285
DNA (453bp) protein (151aa)
NUDIX hydrolase n=1 Tax=Sebaldella termitidis (strain ATCC 33386 / NCTC 11300) RepID=D1AH18_SEBTE
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ACZ08052.1}; TaxID=526218 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Sebaldella.;" source="Sebaldella termitidis (strain ATCC 33386 / NCTC 11300).;"
Meg22_1012_Bin_201_scaffold_1558_44
unknown

Not on your lists

34703..34909
DNA (207bp) protein (69aa)

This feature has no annotations

Meg22_1012_Bin_201_scaffold_1558_45
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

34927..35997
DNA (1071bp) protein (357aa)
UPI00020A986A related cluster id=2101108 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfobium narugense genus=Thermodesulfobium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Radical SAM domain protein
Tax=RBG_13_Nitrospirae_43_8_curated
Meg22_1012_Bin_201_scaffold_1558_46

Not on your lists

35975..36508
DNA (534bp) protein (178aa)
Tellurite resistance protein TehB n=1 Tax=Streptococcus mitis 11/5 RepID=R0LLA7_STRMT
Marine sediment metagenome DNA, contig: S03H2_S16450 {ECO:0000313|EMBL:GAH62266.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
tehB; tellurite resistance protein TehB
Meg22_1012_Bin_201_scaffold_1558_47
GWA2_OD1_38_13, Parcubacteria, Bacteria

Not on your lists

36495..37160
DNA (666bp) protein (222aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ55657.1}; TaxID=1618811 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_38_13.;"
Meg22_1012_Bin_201_scaffold_1558_48
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(37526..37978)
DNA (453bp) protein (151aa)
GCN5-related N-acetyltransferase n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DG01_9EURY id=12879 bin=ACD18 species=Candidatus Micrarchaeum acidiphilum genus=Candidatus Micrarchaeum taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
hypothetical protein
Tax=RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated
Meg22_1012_Bin_201_scaffold_1558_49
unknown

Not on your lists

comp(38346..38699)
DNA (354bp) protein (118aa)

This feature has no annotations

Meg22_1012_Bin_201_scaffold_1558_50

Not on your lists

comp(38707..39843)
DNA (1137bp) protein (379aa)
Putative uncharacterized protein n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O29080_ARCFU id=5103280 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62561.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
Meg22_1012_Bin_201_scaffold_1558_51
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

39964..40149
DNA (186bp) protein (62aa)
Tax=AR19
Meg22_1012_Bin_201_scaffold_1558_52

Not on your lists

40594..41181
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8THA0_METAC
Marine sediment metagenome DNA, contig: S06H3_S04082 {ECO:0000313|EMBL:GAI21533.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
Meg22_1012_Bin_201_scaffold_1558_53
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

41168..41548
DNA (381bp) protein (127aa)
transmembrane_regions 20..37 id=1247558 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
Meg22_1012_Bin_201_scaffold_1558_54
unknown

Not on your lists

41704..42129
DNA (426bp) protein (142aa)

This feature has no annotations

Meg22_1012_Bin_201_scaffold_1558_55
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

42172..42840
DNA (669bp) protein (223aa)
Metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein (Fragment) n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WJV3_9EURY
ATP binding protein
Tax=AR13
Meg22_1012_Bin_201_scaffold_1558_56
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

42837..43379
DNA (543bp) protein (181aa)
Glutamine amidotransferase class-I n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WNG2_METH6
Glutamine amidotransferase class-I
Tax=CG_Pacearch_05
Displaying items 31-57 of 57 in total

View Taxonomy