ggKbase home page

Meg22_1416_Bin_115_scaffold_56_129

Organism: Meg22_1416_Bin_115

near complete RP 32 / 55 MC: 3 BSCG 21 / 51 MC: 1 ASCG 37 / 38 MC: 2
Location: comp(115542..116780)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine13 synthase (EC:5.4.99.27) similarity KEGG
DB: KEGG
  • Identity: 50.1
  • Coverage: 411.0
  • Bit_score: 403
  • Evalue 5.80e-110
tRNA pseudouridine synthase D; K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] id=5241783 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 similarity UNIREF
DB: UNIREF100
  • Identity: 50.1
  • Coverage: 411.0
  • Bit_score: 403
  • Evalue 2.00e-109
Probable tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseudouridylate synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA-uridine isomerase D {ECO:0000256|HAMAP-Rule:MF_01082}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.1
  • Coverage: 411.0
  • Bit_score: 403
  • Evalue 2.90e-109

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

archaeon GW2011_AR10 → Archaea

Sequences

DNA sequence
Length: 1239
ATGGATAAAAAATTTTTCACAAAAGCGAAGGGAATCGACGGAAAAATAAAAAGGCGCTATTCGGATTTTGTTGTGGAAGAAATGACAACTGATGGCAAAAAATGCGCAGTTGAATTTTTACTCAATGGAAAAAAAGAATTTGAAAAATTATCCCTGCCTGAAAACGGCAAGGATTTTTTACTACTTGAAATGGAGAAAAAGAACATTGAAACAAACCTTGCAGTCAAAAAAATTGCGCGTTTTATGCACACAAGCCAAAAAAGCATTGGCTATGCTGGCTTAAAAGACAAGCGTGCAATAACCTGTCAGCGGATAAGCATTTACAAACCAAAAAAGGAAAGGATTGAAAATTTTTCAATGCAAGGACTCGTGCTCAAGAATCCTTGCTTCAGTGATAAAGGAATTGATTTGGGAGAATTAAAGGGAAACTATTTCACCATCACAATAAGAGACATTGACCTTGAAGAAAGGGAAATAATTGAAAGGGTTAAAACAGCCTTCAATGAAATAAAAAAGGGAATTCCCAATTATTTTGGGCAACAACGCTTTGGTGGAATTCGCCAAATAAGCCATTTGGTTGGAAAAGAAATAATAAAAGGCAACATTGAAAACGCTGTAATGCTTTACCTTACTGCTCAAAGCGAAAAAGAAGAACCAGAGGTAAAAAAGGCAAGGCTTCATTTAATTCAAACACTAAACTTCAAGCAAGCGGAAAAAGAATTTCCACTAAAATATCGATACGAAAGAGCAATGGCTCACTATTTGGCATCAAACAAGCGAGATTTTTTCGGAGCATTCAATCTGCTTCCCAGGAGACTACGGTTCTTGTTCACTCATGCATATCAATCCTACTTGTTCAACAAAATACTGCAAAAAAGAATAGAAAACCAATTGCTTGAAGCAATTGAAGGAGAACCACAAGAGGATGGAATTCCTTTGGGGTTAATTCCAGGGTTTAATTCCAAGTATTCTCCTGGAAAAATAGGAGAAATTGAAAGAGAAATACTGGAAAAAGAAGGAATCTCTTTTCCAGATTTCAAGGTAAAAAAAATAAAAGAGTGCTCGTGCCAAGGTGCGAGGAGAAAAATATTATTCAAGCCAAAAGAACTAAAATTGATTGAAACTGGAAAAGACGAATTCTTTGATGGAAAAAACTATTGCAAAATATCCTTCTTTCTTGAAAAAGGCGTTTATGCAACAGTGCTATTGGACGAACTAATGAAACAAACAGAAACGTAA
PROTEIN sequence
Length: 413
MDKKFFTKAKGIDGKIKRRYSDFVVEEMTTDGKKCAVEFLLNGKKEFEKLSLPENGKDFLLLEMEKKNIETNLAVKKIARFMHTSQKSIGYAGLKDKRAITCQRISIYKPKKERIENFSMQGLVLKNPCFSDKGIDLGELKGNYFTITIRDIDLEEREIIERVKTAFNEIKKGIPNYFGQQRFGGIRQISHLVGKEIIKGNIENAVMLYLTAQSEKEEPEVKKARLHLIQTLNFKQAEKEFPLKYRYERAMAHYLASNKRDFFGAFNLLPRRLRFLFTHAYQSYLFNKILQKRIENQLLEAIEGEPQEDGIPLGLIPGFNSKYSPGKIGEIEREILEKEGISFPDFKVKKIKECSCQGARRKILFKPKELKLIETGKDEFFDGKNYCKISFFLEKGVYATVLLDELMKQTET*