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Meg22_1416_Bin_28_scaffold_12153_24

Organism: Meg22_1416_Bin_28

near complete RP 39 / 55 MC: 15 BSCG 35 / 51 MC: 6 ASCG 36 / 38 MC: 5
Location: 17151..18338

Top 3 Functional Annotations

Value Algorithm Source
Probable tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseudouridylate synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA-uridine isomerase D {ECO:0000256|HAMAP-Rule:MF_01082}; TaxID=644281 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus sp. (strain FS406-22).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.1
  • Coverage: 388.0
  • Bit_score: 214
  • Evalue 2.40e-52
Probable tRNA pseudouridine synthase D n=1 Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S5X4_METSF similarity UNIREF
DB: UNIREF100
  • Identity: 36.1
  • Coverage: 388.0
  • Bit_score: 214
  • Evalue 1.70e-52
tRNA pseudouridine synthase D TruD similarity KEGG
DB: KEGG
  • Identity: 36.1
  • Coverage: 388.0
  • Bit_score: 214
  • Evalue 4.80e-53

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Taxonomy

Methanocaldococcus sp. FS406-22 → Methanocaldococcus → Methanococcales → Methanococci → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1188
ATGAAAGAAATAATGGAAGAATACGGCATCAAATATTGGACTACAACACCCCCAATAAAGTGTGAATTCAAGAGATTTCCTGAGGATTTTATTGTTGAAGAAATTGATAATTATGGGAAAAAAAGAACTATAAATTATACTTTGATAGAAAAAATAAAAGATTTTTTTCCGAAAAAACAGAAAAGCAAGAAAGAAAAATACATTAATTTTACTTTAATAAAAAGAAATTATACAACACAAAGAGCGTTAGAAGAAATAAGTAAAAGATTAAATGTAAGTCAAACGCGTTTTGATTATGCTGGAACAAAAGATAAAATTGCAATTACAAGCCAAAGCATAAGCGCATTCAAAGTAAGTCTCCCTGATTTAAAAAAAATAAAGATTAAAGACATTCTTATGAAGGATTTTTCTTTTTCAAGAAAGCGATTGAAACTTGGAGATTTGAAAGGAAATTGTTTTAAAATCAGATTAAGAGAATCAAATGCTAAAAAAGAGGTTATGAAGAAATTTAAAGAAGAAATAAAAAAAGGACTGCCAAACTATTTTGGTCCTCAACGTTTTGGAATTCAAAGAAAAACAAATTATCTTGTAGGAAGAGCAATGATCACTGATAATTATAAAAAAGCGATTAAAATTTTCTTAACTCAAACAGGAGATGAACAAAAAGAGGTTACAAATGCAAGAAAAAAACTGAAAAAGGATTGGGGGAGAAAAGGGTTTGAAAGAGCATTAGAAGAATTTCCAAAATACTTAAATTTAGAAAGAAATGTTTTAAAACATCTTTGCCGAAAACAAGAAGATTATCTTGGTGCAATGAAGAGAATTCCAAGAAAATTAAGATTAATGTTTGTTCATTCTGTTCAATCTTACTTATTTAATAAATGCTTAAGTTATTATACTTGGCAGGATGTGCCAGAATATCTTCCATTAATCGGGTACAAAAGTGAGAACATACCTGAAAAAATGAGATTTGTACTTGAAGAAGAAAAAATTAAACCATCTGATTTTAAAACAAAATTAATGCCTGAAATGAGTTTAAAAGGAGGGGAAAGAAAAACAATAATTAAAATAAAAAATTTTAGATACAAAATAAAAAGGAAAGATTTAATACTTGAATTTTGTCTTGATAAAGGTGCTTATGCAACAACAATCATTAATGAATTAACAAAAAATTTAAGTGAAAAATAA
PROTEIN sequence
Length: 396
MKEIMEEYGIKYWTTTPPIKCEFKRFPEDFIVEEIDNYGKKRTINYTLIEKIKDFFPKKQKSKKEKYINFTLIKRNYTTQRALEEISKRLNVSQTRFDYAGTKDKIAITSQSISAFKVSLPDLKKIKIKDILMKDFSFSRKRLKLGDLKGNCFKIRLRESNAKKEVMKKFKEEIKKGLPNYFGPQRFGIQRKTNYLVGRAMITDNYKKAIKIFLTQTGDEQKEVTNARKKLKKDWGRKGFERALEEFPKYLNLERNVLKHLCRKQEDYLGAMKRIPRKLRLMFVHSVQSYLFNKCLSYYTWQDVPEYLPLIGYKSENIPEKMRFVLEEEKIKPSDFKTKLMPEMSLKGGERKTIIKIKNFRYKIKRKDLILEFCLDKGAYATTIINELTKNLSEK*