ggKbase home page

Meg_22_1618_bin_104_scaffold_129

Search features with annotation key words

Displaying items 31-60 of 114 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg_22_1618_bin_104_scaffold_129_31

Not on your lists


comp(28635..29222)
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003818B6E
Marine sediment metagenome DNA, contig: S03H2_L00255 {ECO:0000313|EMBL:GAH34612.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
diphthamide biosynthesis protein
Meg_22_1618_bin_104_scaffold_129_32
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

29320..29826
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000376AB69
histidine triad (HIT) protein
Tax=CG_Woesearch_01
Meg_22_1618_bin_104_scaffold_129_33

Not on your lists

comp(30117..30959)
DNA (843bp) protein (281aa)
Uncharacterized protein {ECO:0000313|EMBL:AIF00785.1}; TaxID=1457870 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_139_C07.;"
Peptidase A24A prepilin type IV id=5800557 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Peptidase A24A prepilin type IV
Meg_22_1618_bin_104_scaffold_129_34

Not on your lists

31013..31675
DNA (663bp) protein (221aa)
Undecaprenyl pyrophosphate synthase {ECO:0000313|EMBL:AIF00786.1}; EC=2.5.1.89 {ECO:0000313|EMBL:AIF00786.1};; TaxID=1457870 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_139_C07.;"
UDP diphosphate synthase (EC:2.5.1.31); K15888 tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89] id=5043940 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
uppS; hypothetical protein
Meg_22_1618_bin_104_scaffold_129_35

Not on your lists

31790..32140
DNA (351bp) protein (117aa)
Ribonuclease P protein component 2 {ECO:0000256|HAMAP-Rule:MF_00755}; Short=RNase P component 2 {ECO:0000256|HAMAP-Rule:MF_00755};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00755};; Pop5 {ECO:0000256|HAMAP-Rule:MF_00755}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Ribonuclease P protein component 2 id=5046930 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Ribonuclease P protein component 2
Meg_22_1618_bin_104_scaffold_129_36
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

32143..32880
DNA (738bp) protein (246aa)
psmA; proteasome subunit alpha (EC:3.4.25.1); K03432 proteasome alpha subunit [EC:3.4.25.1] id=5046929 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Proteasome subunit alpha
Tax=RBG_13_Woesearchaeota_36_6_curated
Meg_22_1618_bin_104_scaffold_129_37
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


32882..33583
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003829AF7
Ribosome maturation protein SDO1-like protein
Tax=CG_Woesearch_02
Meg_22_1618_bin_104_scaffold_129_38

Not on your lists

33721..34416
DNA (696bp) protein (232aa)
rpr43; exosome RNA binding protein (EC:3.1.13.-); K03679 exosome complex component RRP4 id=5046927 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Exosome complex component Rrp4 {ECO:0000256|HAMAP-Rule:MF_00623}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
putative exosome complex RNA-binding protein 1
Meg_22_1618_bin_104_scaffold_129_39
GWA2_OP11_46_7, Microgenomates, Bacteria

Not on your lists

34418..35116
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036BC30A
Exosome complex exonuclease Rrp41 {ECO:0000313|EMBL:KKU44650.1}; TaxID=1618502 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWA2_46_7.;"
exosome complex exonuclease Rrp41
Meg_22_1618_bin_104_scaffold_129_40
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

35113..35892
DNA (780bp) protein (260aa)
exosome complex RNA-binding protein Rrp42; K12589 exosome complex component RRP42 id=5046925 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Ribosomal RNA-processing protein RRP42
Tax=CG_Woesearch_02
Meg_22_1618_bin_104_scaffold_129_41
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

35913..36119
DNA (207bp) protein (69aa)
UPI000021CFC7 related cluster n=1 Tax=unknown RepID=UPI000021CFC7 id=5103847 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Tax=CG_Woesearch_02
Meg_22_1618_bin_104_scaffold_129_42
unknown

Not on your lists

comp(36122..36730)
DNA (609bp) protein (203aa)

This feature has no annotations

Meg_22_1618_bin_104_scaffold_129_43
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

36811..37092
DNA (282bp) protein (94aa)
hypothetical protein; K09728 hypothetical protein id=5045726 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
Tax=AR18
Meg_22_1618_bin_104_scaffold_129_44
unknown

Not on your lists

comp(37089..37427)
DNA (339bp) protein (113aa)

This feature has no annotations

Meg_22_1618_bin_104_scaffold_129_45
Parcubacteria bacterium GW2011_GWA2_46_9, Parcubacteria, Bacteria

Not on your lists

comp(37424..38410)
DNA (987bp) protein (329aa)
Putative tRNA pseudouridine synthase B {ECO:0000313|EMBL:KKU47144.1}; Flags: Fragment;; TaxID=1618838 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_46_9.;"
Probable tRNA pseudouridine synthase B id=5799607 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
putative tRNA pseudouridine synthase B
Meg_22_1618_bin_104_scaffold_129_46
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists


comp(38810..39340)
DNA (531bp) protein (177aa)
Ribosomal protein L31e id=5800693 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Ribosomal protein L31e
Tax=CG_Woesearch_01
Meg_22_1618_bin_104_scaffold_129_47
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(39421..39594)
DNA (174bp) protein (58aa)
id=5800694 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=AR15
Meg_22_1618_bin_104_scaffold_129_48
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(39596..40150)
DNA (555bp) protein (185aa)
30S ribosomal protein S19; K02966 small subunit ribosomal protein S19e id=5049179 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
30S ribosomal protein S19
Tax=AR11
Meg_22_1618_bin_104_scaffold_129_49
unknown

Not on your lists

40284..40601
DNA (318bp) protein (106aa)

This feature has no annotations

Meg_22_1618_bin_104_scaffold_129_50
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

40602..43193
DNA (2592bp) protein (864aa)
ATP dependent helicase, lhr family; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] id=5049176 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DEAD/H associated protein
Tax=RBG_13_Woesearchaeota_36_6_curated
Meg_22_1618_bin_104_scaffold_129_51
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

43233..43673
DNA (441bp) protein (147aa)
S-adenosylmethionine decarboxylase proenzyme n=1 Tax=Macrococcus caseolyticus (strain JCSC5402) RepID=B9E851_MACCJ
spermidine synthase
Tax=RBG_13_RIF_OD1_08_37_53_curated
Meg_22_1618_bin_104_scaffold_129_52
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

43697..44398
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003650638
Phosphoesterase
Tax=CG_Woesearch_02
Meg_22_1618_bin_104_scaffold_129_53
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(44390..44896)
DNA (507bp) protein (169aa)
Uncharacterised protein family UPF0153 id=5799564 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=CG_Woesearch_02
Meg_22_1618_bin_104_scaffold_129_54
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(44893..45330)
DNA (438bp) protein (146aa)
Chaperon, small heat shock protein Hsp20 n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I9C8_METCZ
hsp20-2; chaperon, small heat shock protein Hsp20
Chaperon, small heat shock protein Hsp20 {ECO:0000313|EMBL:AFC99546.1}; TaxID=1041930 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 /; HZ254).;"
Meg_22_1618_bin_104_scaffold_129_55
Brachybacterium muris, Brachybacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(45408..45575)
DNA (168bp) protein (56aa)
PREDICTED: cell surface glycoprotein 1-like n=1 Tax=Bombus impatiens RepID=UPI00022CA53A
membrane carboxypeptidase (penicillin-binding protein)
Carboxypeptidase {ECO:0000313|EMBL:EYT48967.1}; TaxID=1249481 species="Bacteria; Actinobacteria; Micrococcales; Dermabacteraceae; Brachybacterium.;" source="Brachybacterium muris UCD-AY4.;"
Meg_22_1618_bin_104_scaffold_129_56
GWA2_OP11_38_24, Daviesbacteria, Microgenomates, Bacteria

Not on your lists


comp(45663..46181)
DNA (519bp) protein (173aa)
50S ribosomal protein L15e {ECO:0000313|EMBL:KKQ64451.1}; TaxID=1618422 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_38_24.;"
50S ribosomal protein L15e id=5799715 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L15
Meg_22_1618_bin_104_scaffold_129_57

Not on your lists

46343..47326
DNA (984bp) protein (328aa)
Bifunctional phosphoglucose/phosphomannose isomerase (Pgi-pmi) {ECO:0000313|EMBL:AIF00813.1}; EC=5.3.1.8 {ECO:0000313|EMBL:AIF00813.1};; TaxID=1457870 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_139_C07.;"
bifunctional phosphoglucose/phosphomannose isomerase (EC:5.3.1.8)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000360FED9
Meg_22_1618_bin_104_scaffold_129_58
Parcubacteria bacterium GW2011_GWA2_48_9, Parcubacteria, Bacteria

Not on your lists

47323..49386
DNA (2064bp) protein (688aa)
SMC domain protein n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A5V4_NITMS id=5103605 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:KKU99675.1}; Flags: Fragment;; TaxID=1618850 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_48_9.;"
SMC protein
Meg_22_1618_bin_104_scaffold_129_59
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

49481..50902
DNA (1422bp) protein (474aa)
transmembrane_regions id=5043982 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=CG_Woesearch_01
Meg_22_1618_bin_104_scaffold_129_60
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists


50954..51457
DNA (504bp) protein (168aa)
SSU ribosomal protein S6E id=5799714 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S6e
Tax=RBG_13_Woesearchaeota_36_6_curated
Displaying items 31-60 of 114 in total

View Taxonomy