ggKbase home page

Meg_22_1618_bin_104_scaffold_272

Search features with annotation key words

Displaying items 31-60 of 106 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg_22_1618_bin_104_scaffold_272_31

Not on your lists


comp(23605..24141)
DNA (537bp) protein (179aa)
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 id=5042314 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L5
Meg_22_1618_bin_104_scaffold_272_32
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(24143..24826)
DNA (684bp) protein (228aa)
30S ribosomal protein S4E; K02987 small subunit ribosomal protein S4e id=5042313 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
30S ribosomal protein S4
Tax=CG_Woesearch_02
Meg_22_1618_bin_104_scaffold_272_33

Not on your lists


comp(24823..25215)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000372D201
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl24p; 50S ribosomal protein L24P
Meg_22_1618_bin_104_scaffold_272_34

Not on your lists


comp(25217..25618)
DNA (402bp) protein (134aa)
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl14p; 50S ribosomal protein L14P; K02874 large subunit ribosomal protein L14 id=5042311 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L14P
Meg_22_1618_bin_104_scaffold_272_35

Not on your lists


comp(25615..25920)
DNA (306bp) protein (102aa)
30S ribosomal protein S17P n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VYH7_9EURY
30S ribosomal protein S17P {ECO:0000313|EMBL:AJS13339.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S17
Meg_22_1618_bin_104_scaffold_272_36
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(25917..26153)
DNA (237bp) protein (79aa)
ribonuclease P protein component 1 (EC:3.1.26.5)
Ribonuclease P protein component 1 n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=RNP1_METJA
Tax=CG_Woesearch_02
Meg_22_1618_bin_104_scaffold_272_37
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(26164..26472)
DNA (309bp) protein (103aa)
Protein translation factor SUI1 homolog n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=SUI1_ARCFU id=5103260 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Protein translation factor SUI1-like protein
Tax=CG_Woesearch_02
Meg_22_1618_bin_104_scaffold_272_38
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(26487..26684)
DNA (198bp) protein (66aa)
50S ribosomal protein L29P n=1 Tax=Methanotorris formicicus Mc-S-70 RepID=H1KXU8_9EURY
50S ribosomal protein L29
Tax=CG_Woesearch_02
Meg_22_1618_bin_104_scaffold_272_39

Not on your lists


comp(26686..27342)
DNA (657bp) protein (219aa)
30S ribosomal protein S3 n=1 Tax=uncultured organism RepID=U3GQQ3_9ZZZZ
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S3
Meg_22_1618_bin_104_scaffold_272_40

Not on your lists


comp(27339..27776)
DNA (438bp) protein (146aa)
50S ribosomal protein L22 {ECO:0000256|RuleBase:RU004007}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 id=5042305 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L22
Meg_22_1618_bin_104_scaffold_272_41

Not on your lists


comp(27778..28161)
DNA (384bp) protein (128aa)
50S ribosomal protein L2P {ECO:0000313|EMBL:AJS12488.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rps19p; 30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 id=5042304 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rps19p; 30S ribosomal protein S19
Meg_22_1618_bin_104_scaffold_272_42

Not on your lists


comp(28163..28876)
DNA (714bp) protein (238aa)
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320, ECO:0000256|SAAS:SAAS00010821}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 id=5042303 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rpl2p; 50S ribosomal protein L2
Meg_22_1618_bin_104_scaffold_272_43

Not on your lists


comp(28882..29133)
DNA (252bp) protein (84aa)
50S ribosomal protein L23P n=3 Tax=Thermococcus RepID=RL23_PYRKO id=5103254 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L23P
50S ribosomal protein L23P {ECO:0000313|EMBL:AJF62535.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
Meg_22_1618_bin_104_scaffold_272_44

Not on your lists


comp(29135..29941)
DNA (807bp) protein (269aa)
50S ribosomal protein L4 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RL4_NANEQ id=5103253 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L4P {ECO:0000313|EMBL:AJS12462.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L4
Meg_22_1618_bin_104_scaffold_272_45

Not on your lists


comp(29944..30927)
DNA (984bp) protein (328aa)
50S ribosomal protein L3 {ECO:0000256|SAAS:SAAS00023038}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 id=5042300 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L3
Meg_22_1618_bin_104_scaffold_272_46
unknown

Not on your lists

31360..31755
DNA (396bp) protein (132aa)

This feature has no annotations

Meg_22_1618_bin_104_scaffold_272_47

Not on your lists

comp(31752..33056)
DNA (1305bp) protein (435aa)
hypothetical protein; K00992 [EC:2.7.7.-] id=5041758 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO47186.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
hypothetical protein
Meg_22_1618_bin_104_scaffold_272_48
unknown

Not on your lists

comp(33082..34455)
DNA (1374bp) protein (458aa)

This feature has no annotations

Meg_22_1618_bin_104_scaffold_272_49
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

34623..34985
DNA (363bp) protein (121aa)
TOPRIM domain-containing protein id=5050201 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Toprim protein
Tax=RBG_13_Woesearchaeota_36_6_curated
Meg_22_1618_bin_104_scaffold_272_50
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(34960..35352)
DNA (393bp) protein (131aa)
Putative signal transduction protein n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VRB9_9EURY
hypothetical protein
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg_22_1618_bin_104_scaffold_272_51
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

35397..36254
DNA (858bp) protein (286aa)
Protease HtpX homolog id=5799559 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
protease
Tax=AR15
Meg_22_1618_bin_104_scaffold_272_52
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(36251..38455)
DNA (2205bp) protein (735aa)
Hef nuclease; K10896 fanconi anemia group M protein id=5041753 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DEAD/DEAH box helicase
Tax=CG_Woesearch_02
Meg_22_1618_bin_104_scaffold_272_53
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(38520..39251)
DNA (732bp) protein (244aa)
Peptidase M50 id=5041751 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=CG_Woesearch_02
Meg_22_1618_bin_104_scaffold_272_54
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(39259..39939)
DNA (681bp) protein (227aa)
TraB family protein n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VSP1_METIM id=5103107 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
TraB family protein
Tax=CG_Woesearch_02
Meg_22_1618_bin_104_scaffold_272_55

Not on your lists

40055..40333
DNA (279bp) protein (93aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50522.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
Putative uncharacterized protein id=5800011 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Meg_22_1618_bin_104_scaffold_272_56
unknown

Not on your lists

comp(40537..40728)
DNA (192bp) protein (64aa)

This feature has no annotations

Meg_22_1618_bin_104_scaffold_272_57
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(40748..41491)
DNA (744bp) protein (248aa)
DNA polymerase sliding clamp; K04802 proliferating cell nuclear antigen id=5046287 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA polymerase sliding clamp
Tax=RBG_13_Woesearchaeota_36_6_curated
Meg_22_1618_bin_104_scaffold_272_58

Not on your lists

comp(41544..42884)
DNA (1341bp) protein (447aa)
RNA-metabolising metallo-beta-lactamase n=1 Tax=Methanothermococcus okinawensis (strain DSM 14208 / JCM 11175 / IH1) RepID=F8AM50_METOI id=5102974 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Putative hydrolase {ECO:0000313|EMBL:KHO53043.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
RNA-metabolising metallo-beta-lactamase
Meg_22_1618_bin_104_scaffold_272_59

Not on your lists

comp(43050..43448)
DNA (399bp) protein (133aa)
Marine sediment metagenome DNA, contig: S12H4_S12223 {ECO:0000313|EMBL:GAJ07382.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
id=5046267 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Meg_22_1618_bin_104_scaffold_272_60

Not on your lists

comp(43451..43684)
DNA (234bp) protein (78aa)
id=5046266 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46067.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Displaying items 31-60 of 106 in total

View Taxonomy